Search results
- 1.0577299 - BFÚ 2024 RIV US eng J - Journal Article
Šponer, Judit E. - Kloužek, Jaroslav - Výravský, J. - Wunnava, S. - Scheu, B. - Braun, N. - Mojzsis, Stephen J. - Palacký, Jan - Vorlíčková, Michaela - Šponer, Jiří - Matyášek, Roman - Kovařík, Aleš
Influence of Silicate Rock Glass Compositions on the Efficacy of Prebiotic RNA Polymerization Reactions: The Case of 3',5' Cyclic Guanosine Monophosphate.
CHEMSYSTEMSCHEM. Roč. 5, č. 5 (2023). E-ISSN 2570-4206
R&D Projects: GA ČR(CZ) GA22-25057S
Institutional support: RVO:68081707 ; RVO:67985891
Keywords : oligomerization * prebiotic chemistry * oligonucleotides * rock glasses * basicity
OECD category: Analytical chemistry; Analytical chemistry (USMH-B)
Impact factor: 3.5, year: 2022
Method of publishing: Open access
https://chemistry-europe.onlinelibrary.wiley.com/doi/epdf/10.1002/syst.202300016
Permanent Link: https://hdl.handle.net/11104/0346507 - 2.0576584 - BFÚ 2024 RIV US eng J - Journal Article
Šponer, Judit E. - Šponer, Jiří - Výravský, J. - Matyášek, Roman - Kovařík, Aleš - Dudziak, W. - Slepokura, K.
Crystallization as a selection force at the polymerization of nucleotides in a prebiotic context.
iScience. Roč. 26, č. 9 (2023), č. článku 107600. E-ISSN 2589-0042
R&D Projects: GA ČR(CZ) GA22-25057S
Institutional support: RVO:68081707
Keywords : 3′,5′cGMP * 3′,5′cCMP (free acid) readily crystallize from nucleotide mixtures * Crystallization could sequester 3′,5′cGMP * 3′,5′cCMP from the prebiotic soup * 3′,5′cCMP and 3′,5′cGMP phase-separate upon dry-wet cycling
OECD category: Organic chemistry
Impact factor: 5.8, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S2589004223016772?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0349241 - 3.0555402 - BFÚ 2022 RIV DE eng J - Journal Article
Wunnava, S. - Dirscherl, C. - Výravský, J. - Kovařík, Aleš - Matyášek, Roman - Šponer, Jiří - Braun, D. - Šponer, Judit E.
Acid-Catalyzed RNA-Oligomerization from 3',5'-cGMP.
Chemistry - A European Journal. Roč. 27, č. 70 (2021), s. 17581-17585. ISSN 0947-6539. E-ISSN 1521-3765
Institutional support: RVO:68081707
Keywords : polymerization * oligonucleotides * molecules * chemistry
OECD category: Organic chemistry
Impact factor: 5.020, year: 2021
Method of publishing: Open access
https://chemistry-europe.onlinelibrary.wiley.com/doi/10.1002/chem.202103672
Permanent Link: http://hdl.handle.net/11104/0329923 - 4.0555335 - BFÚ 2022 RIV CH eng J - Journal Article
Matyášek, Roman - Řehůřková, Kateřina - Marošiová, Kristýna - Kovařík, Aleš
Mutational Asymmetries in the SARS-CoV-2 Genome May Lead to Increased Hydrophobicity of Virus Proteins.
Genes. Roč. 12, č. 6 (2021), č. článku 826. E-ISSN 2073-4425
R&D Projects: GA ČR(CZ) GA19-03442S; GA ČR(CZ) GA20-28029S
Institutional support: RVO:68081707
Keywords : rna virus * emergence * evolution * diversity * covid-19
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 4.141, year: 2021
Method of publishing: Open access
https://www.mdpi.com/2073-4425/12/6/826
Permanent Link: http://hdl.handle.net/11104/0329844 - 5.0554850 - BFÚ 2022 RIV US eng J - Journal Article
Šponer, Judit E. - Šponer, Jiří - Výravský, J. - Šedo, O. - Zdráhal, Z. - Costanzo, G. - Di Mauro, E. - Wunnava, S. - Braun, D. - Matyášek, Roman - Kovařík, Aleš
Non-Enzymatic, Template-Free Polymerization of 3',5' Cyclic Guanosine Monophosphate on Mineral Surfaces.
CHEMSYSTEMSCHEM. Roč. 3, č. 6 (2021). E-ISSN 2570-4206
R&D Projects: GA ČR(CZ) GA19-03442S
Institutional support: RVO:68081707
Keywords : long prebiotic oligomers * origin * oligonucleotides * crystal * life
OECD category: Biochemistry and molecular biology
Method of publishing: Limited access
https://chemistry-europe.onlinelibrary.wiley.com/doi/10.1002/syst.202100017
Permanent Link: http://hdl.handle.net/11104/0329477 - 6.0554414 - BFÚ 2022 RIV CH eng J - Journal Article
Sochorová, Jana - Galvez, F. - Matyášek, Roman - Garcia, S. - Kovařík, Aleš
Analyses of the Updated Animal rDNA Loci Database with an Emphasis on Its New Features.
International Journal of Molecular Sciences. Roč. 22, č. 21 (2021), č. článku 11403. E-ISSN 1422-0067
R&D Projects: GA ČR(CZ) GA19-03442S; GA ČR(CZ) GA20-28029S
Institutional support: RVO:68081707
Keywords : ribosomal-rna genes * in-situ hybridization * nucleolar organizer regions * evolutionary dynamics * 5s rdna * chromosomal localization
OECD category: Biochemistry and molecular biology
Impact factor: 6.208, year: 2021
Method of publishing: Open access
https://www.mdpi.com/1422-0067/22/21/11403
Permanent Link: http://hdl.handle.net/11104/0329111 - 7.0539348 - BFÚ 2021 RIV CH eng J - Journal Article
Matyášek, Roman - Kovařík, Aleš
Mutation Patterns of Human SARS-CoV-2 and Bat RaTG13 Coronavirus Genomes Are Strongly Biased Towards C > U Transitions, Indicating Rapid Evolution in Their Hosts.
Genes. Roč. 11, č. 7 (2020), č. článku 761. E-ISSN 2073-4425
R&D Projects: GA ČR(CZ) GC20-14133J; GA ČR(CZ) GA20-28029S
Institutional support: RVO:68081707
Keywords : cpg * methylation * cytosine * substitutions * rates * evolution
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 4.096, year: 2020
Method of publishing: Open access
https://www.mdpi.com/2073-4425/11/7/761
Permanent Link: http://hdl.handle.net/11104/0317039 - 8.0518371 - BFÚ 2020 RIV GB eng J - Journal Article
Matyášek, Roman - Kuderová, Alena - Kutílková, Eva - Kučera, Marek - Kovařík, Aleš
Intragenomic heterogeneity of intergenic ribosomal DNA spacers in Cucurbita moschata is determined by DNA minisatellites with variable potential to form non-canonical DNA conformations.
Dna Research. Roč. 26, č. 3 (2019), s. 273-286. ISSN 1340-2838. E-ISSN 1756-1663
R&D Projects: GA ČR GA17-11642S
Institutional support: RVO:68081707
Keywords : rna-polymerase-i * nucleolar dominance * differential expression * molecular evolution * nuclear proteins
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 4.009, year: 2019
Method of publishing: Open access
https://academic.oup.com/dnaresearch/article-pdf/26/3/273/28855582/dsz008.pdf
Permanent Link: http://hdl.handle.net/11104/0303527 - 9.0518325 - BFÚ 2020 RIV CH eng J - Journal Article
Matyášek, Roman - Krumpolcová, Alice - Lunerová Bedřichová, Jana - Mikulášková, E. - Rosselló, J. A. - Kovařík, Aleš
Unique Epigenetic Features of Ribosomal RNA Genes (rDNA) in Early Diverging Plants (Bryophytes).
Frontiers in Plant Science. Roč. 10, SEP 5 2019 (2019), č. článku 1066. ISSN 1664-462X. E-ISSN 1664-462X
R&D Projects: GA ČR(CZ) GA19-03442S; GA ČR GA17-11642S
Institutional support: RVO:68081707
Keywords : moss tortula-ruralis * physcomitrella-patens * dna methylation * phylogenetic-relationships * cytosine methylation
OECD category: Plant sciences, botany
Impact factor: 4.402, year: 2019
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fpls.2019.01066/pdf
Permanent Link: http://hdl.handle.net/11104/0303491 - 10.0485527 - BFÚ 2018 RIV AT eng J - Journal Article
Lunerová Bedřichová, Jana - Renny-Byfield, S. - Matyášek, Roman - Leitch, A. - Kovařík, Aleš
Concerted evolution rapidly eliminates sequence variation in rDNA coding regions but not in intergenic spacers in Nicotiana tabacum allotetraploid.
Plant Systematics and Evolution. Roč. 303, č. 8 (2017), s. 1043-1060. ISSN 0378-2697. E-ISSN 1615-6110
R&D Projects: GA ČR(CZ) GA17-11642S; GA ČR(CZ) GC16-02149J
Institutional support: RVO:68081707
Keywords : Concerted evolution * Immunomodulation * Neutrophils
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 1.452, year: 2017
Permanent Link: http://hdl.handle.net/11104/0280510