Search results
- 1.0567476 - ÚMG 2023 RIV GB eng J - Journal Article
Petržílek, Jan - Pasulka, Josef - Malík, Radek - Horvat, Filip - Kataruka, Shubhangini - Fulka, Helena - Svoboda, Petr
De novo emergence, existence, and demise of a protein-coding gene in murids.
BMC BIOLOGY. Roč. 20, č. 1 (2022), č. článku 272. E-ISSN 1741-7007
R&D Projects: GA MŠMT(CZ) EF18_046/0016045; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) LM2018126
EU Projects: European Commission(XE) 647403 - D-FENS
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:68378050
Keywords : De novo * Gene * Evolution * ltr * Retrotransposon * cag * Polyserine * D6Ertd527e * Oocyte
OECD category: Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-022-01470-5
Permanent Link: https://hdl.handle.net/11104/0338724 - 2.0567393 - ÚMG 2023 RIV US eng J - Journal Article
Zapletal, D. - Táborská, Eliška - Pasulka, Josef - Malík, Radek - Kubíček, Karel - Zanova, M. - Much, C. - Šebesta, M. - Buccheri, Valeria - Horvat, Filip - Jeníčková, Irena - Procházková, Michaela - Procházka, Jan - Pinkas, M. - Nováček, J. - Florian Joseph, Diego André - Sedláček, Radislav - Bernecky, C. - O'Carroll, D. - Štefl, R. - Svoboda, Petr
Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Molecular Cell. Roč. 82, č. 21 (2022), s. 4064-4079e.13. ISSN 1097-2765. E-ISSN 1097-4164
R&D Projects: GA MŠMT(CZ) LM2018126; GA MŠMT(CZ) LM2018131; GA ČR GX20-03950X; GA MŠMT EF18_046/0015861
EU Projects: European Commission(XE) 647403 - D-FENS
Research Infrastructure: e-INFRA CZ - 90140; CIISB II - 90127
Institutional support: RVO:68378050
Keywords : cryo-em structure * guide strand selection * rna-binding * structure validation * expression * molprobity * trbp complex * mouse * specifity
OECD category: Biochemistry and molecular biology
Impact factor: 16, year: 2022
Method of publishing: Open access
https://doi.org/10.1016/j.molcel.2022.10.010
Permanent Link: https://hdl.handle.net/11104/0338651 - 3.0555394 - ÚMG 2022 RIV CH eng J - Journal Article
Malík, Radek - Svoboda, Petr
CRISPR-Induced Expression of N-Terminally Truncated Dicer in Mouse Cells.
Genes. Roč. 12, č. 4 (2021), č. článku 540. E-ISSN 2073-4425
R&D Projects: GA ČR GX20-03950X
Institutional support: RVO:68378050
Keywords : RNAi * Dicer * crispr * dCas9 * vp64 * ms2 * sgRNA
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 4.141, year: 2021
Method of publishing: Open access
https://www.mdpi.com/2073-4425/12/4/540
Permanent Link: http://hdl.handle.net/11104/0329915 - 4.0555019 - ÚMG 2022 RIV DE eng J - Journal Article
Loubalová, Zuzana - Fulka, Helena - Horvat, Filip - Pasulka, Josef - Malík, Radek - Hirose, M. - Ogura, A. - Svoboda, Petr
Formation of spermatogonia and fertile oocytes in golden hamsters requires piRNAs.
Nature Cell Biology. Roč. 23, č. 9 (2021), s. 992-1021. ISSN 1465-7392. E-ISSN 1476-4679
R&D Projects: GA MŠMT(CZ) LM2018126; GA MŠMT(CZ) LM2018129
Research Infrastructure: CCP II - 90126; Czech-BioImaging II - 90129
Institutional support: RVO:68378050
Keywords : piwi proteins * genome activation * mammalian oocytes * r package * mili * retrotransposon * genes * mov10l1 * stage * roles
OECD category: Cell biology
Impact factor: 28.213, year: 2021
Method of publishing: Open access
https://www.nature.com/articles/s41556-021-00746-2
Permanent Link: http://hdl.handle.net/11104/0329636 - 5.0537847 - ÚMG 2021 RIV GB eng J - Journal Article
Kataruka, Shubhangini - Modrák, Martin - Kinterová, Veronika - Malík, Radek - Zeitler, D.M. - Horvat, Filip - Kaňka, Jiří - Meister, G. - Svoboda, Petr
MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes.
Nucleic Acids Research. Roč. 48, č. 14 (2020), s. 8050-8062. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT LO1419; GA MŠMT(CZ) LM2015047; GA MŠMT(CZ) LM2018131
Institutional support: RVO:68378050 ; RVO:61388971 ; RVO:67985904
Keywords : 3 abundance classes * gene-expression * messenger-rna * endogenous sirnas * let-7 represses * mouse oocytes * binding * dicer * cell * transcriptome
OECD category: Reproductive biology (medical aspects to be 3); Developmental biology (UZFG-Y); Biochemistry and molecular biology (MBU-M)
Impact factor: 16.971, year: 2020
Method of publishing: Open access
https://academic.oup.com/nar/article/48/14/8050/5866099
Permanent Link: http://hdl.handle.net/11104/0315680 - 6.0525646 - ÚMG 2021 RIV GB eng J - Journal Article
Ganesh, Sravya - Horvat, Filip - Drutovič, Dávid - Efenberková, Michaela - Pinkas, Dominik - Jindrová, Anna - Pasulka, Josef - Iyyappan, Rajan - Malík, Radek - Šušor, Andrej - Vlahovicek, K. - Šolc, Petr - Svoboda, Petr
The most abundant maternal lncRNA Sirena1 acts post-transcriptionally and impacts mitochondrial distribution.
Nucleic Acids Research. Roč. 48, č. 6 (2020), s. 3211-3227. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT LO1419; GA MŠMT(CZ) LO1609; GA MŠMT(CZ) LM2011032; GA MŠMT(CZ) LM2015040; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2015062; GA ČR(CZ) GA18-19395S
Grant - others:GA MŠk(CZ) LM2015042
Institutional support: RVO:68378050 ; RVO:67985904
Keywords : gene-expression * messenger-rna * mouse oocytes * maturation * single * cell * normalization * transcription * evolution * sirnas
OECD category: Reproductive biology (medical aspects to be 3); Cell biology (UZFG-Y)
Impact factor: 16.971, year: 2020
Method of publishing: Open access
https://academic.oup.com/nar/article/48/6/3211/5709715
Permanent Link: http://hdl.handle.net/11104/0309757 - 7.0521827 - ÚMG 2020 RIV US eng J - Journal Article
Demeter, Tomáš - Vaškovicová, Michaela - Malík, Radek - Horvat, Filip - Pasulka, Josef - Svobodová, Eliška - Flemr, Matyáš - Svoboda, Petr
Main Constraints for RNAi Induced by Expressed Long dsRNA in Mouse Cells.
Life Science Alliance. Roč. 2, č. 1 (2019), č. článku e201800289. E-ISSN 2575-1077
R&D Projects: GA ČR(CZ) GBP305/12/G034; GA MŠMT LO1419
Grant - others:GA MŠk(CZ) LM2015042
Institutional support: RVO:68378050
Keywords : RNAi * dsRNA * Dicer
OECD category: Biochemistry and molecular biology
Impact factor: 2.622, year: 2019
Method of publishing: Open access
https://www.life-science-alliance.org/content/2/1/e201800289
Permanent Link: http://hdl.handle.net/11104/0306388File Download Size Commentary Version Access Life_Science_Alliance_T_Demeter_2019.pdf 3 2.1 MB Publisher’s postprint require - 8.0521819 - ÚMG 2020 RIV US eng J - Journal Article
Táborská, Eliška - Pasulka, Josef - Malík, Radek - Horvat, Filip - Jeníčková, Irena - Matoševič, Z.J. - Svoboda, Petr
Restricted and Non-Essential Redundancy of RNAi and piRNA Pathways in Mouse Oocytes.
PLoS Genetics. Roč. 15, č. 12 (2019), č. článku e1008261. ISSN 1553-7404. E-ISSN 1553-7404
R&D Projects: GA MŠMT LO1419; GA MŠMT(CZ) LM2015040; GA MŠMT ED2.1.00/19.0395; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2015062; GA MŠMT(CZ) LM2015040; GA MŠMT ED2.1.00/19.0395
Grant - others:GA MŠk(CZ) LM2015042
Institutional support: RVO:68378050
Keywords : DOUBLE-STRANDED-RNA * GENE-EXPRESSION * RETROTRANSPOSON SUBFAMILY * MAMMALIAN OOCYTES * PIWI PROTEINS MILI * IDENTIFICATION * AMPLIFICATION * TRANSCRIPTION * INTERFERENCE
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 5.175, year: 2019
Method of publishing: Open access
https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008261
Permanent Link: http://hdl.handle.net/11104/0306383File Download Size Commentary Version Access Plos_Genetics_E_Taborska_2019.pdf 2 2.6 MB Publisher’s postprint require - 9.0501796 - ÚMG 2019 RIV US eng J - Journal Article
Horvat, Filip - Fulka, Helena - Jankele, R. - Malík, Radek - Jun, M. - Šolcová, Kateřina - Sedláček, Radislav - Vlahovicek, K. - Schultz, R. M. - Svoboda, Petr
Role of Cnot6l in maternal mRNA turnover.
Life Science Alliance. Roč. 1, č. 4 (2018), č. článku e201800084. E-ISSN 2575-1077
R&D Projects: GA MŠMT LO1419; GA MŠMT(CZ) LM2015040; GA ČR(CZ) GBP305/12/G034; GA MŠMT ED2.1.00/19.0395
Institutional support: RVO:68378050
Keywords : ccr4-not complex * deadenylation * transcriptome * programs * embryos
OECD category: Reproductive biology (medical aspects to be 3)
Permanent Link: http://hdl.handle.net/11104/0294065 - 10.0495161 - ÚMG 2019 RIV CH eng J - Journal Article
Bruštíková, Kateřina - Sedlák, David - Kubíková, Jana - Škuta, Ctibor - Šolcová, Kateřina - Malík, Radek - Bartůněk, Petr - Svoboda, Petr
Cell-Based Reporter System for High-Throughput Screening of MicroRNA Pathway Inhibitors and Its Limitations.
Frontiers in genetics. Roč. 9, Únor (2018), č. článku 45. E-ISSN 1664-8021
R&D Projects: GA ČR GA13-29531S; GA MŠMT LO1220; GA MŠMT LM2015063
Institutional support: RVO:68378050
Keywords : miRNA * high-throughput screening * let-7 * miR-30 * Argonaute
OECD category: Cell biology
Impact factor: 3.517, year: 2018
Permanent Link: http://hdl.handle.net/11104/0288172