Search results
- 1.0574688 - MBÚ 2024 RIV IE eng J - Journal Article
Dytrtová, J. J. - Bělonožníková, K. - Jakl, M. - Chmelík, Josef - Kováč, I. - Ryšlavá, H.
Non-target biotransformation enzymes as a target for triazole-zinc mixtures.
Chemico-Biological Interactions. Roč. 382, 1 September (2023), č. článku 110625. ISSN 0009-2797. E-ISSN 1872-7786
Institutional support: RVO:61388971
Keywords : Antifungals * Cocktail effect * Inhibitory effect
OECD category: Microbiology
Impact factor: 5.1, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0009279723002922?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0344925 - 2.0551051 - MBÚ 2022 RIV US eng J - Journal Article
Fojtík, Lukáš - Fiala, Jan - Pompach, Petr - Chmelík, Josef - Matoušek, V. - Beier, Petr - Kukačka, Zdeněk - Novák, Petr
Fast Fluoroalkylation of Proteins Uncovers the Structure and Dynamics of Biological Macromolecules.
Journal of the American Chemical Society. Roč. 143, č. 49 (2021), s. 20670-20679. ISSN 0002-7863. E-ISSN 1520-5126
R&D Projects: GA ČR(CZ) GA19-16084S
EU Projects: European Commission(XE) 823839 - EPIC-XS; European Commission(XE) 731077 - EU_FT-ICR_MS
Research Infrastructure: CIISB II - 90127
Institutional support: RVO:61388971 ; RVO:61388963
Keywords : protein structure * conformational changes * radicals * trifluoromethylation * radical labeling * Togni reagents * fluoroalkylation
OECD category: Biochemistry and molecular biology; Organic chemistry (UOCHB-X)
Impact factor: 16.383, year: 2021
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/jacs.1c07771
Permanent Link: http://hdl.handle.net/11104/0326382 - 3.0543807 - MBÚ 2022 RIV GB eng J - Journal Article
Filandrová, Růžena - Vališ, Karel - Černý, Jiří - Chmelík, Josef - Slavata, Lukáš - Fiala, Jan - Rosůlek, Michal - Kavan, Daniel - Man, Petr - Chum, Tomáš - Cebecauer, Marek - Fabris, D. - Novák, Petr
Motif orientation matters: Structural characterization of TEAD1 recognition of genomic DNA.
Structure. Roč. 29, č. 4 (2021), s. 345-356. ISSN 0969-2126. E-ISSN 1878-4186
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LO1509; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2015043
EU Projects: European Commission(XE) 823839 - EPIC-XS
Research Infrastructure: CIISB - 90043
Institutional support: RVO:61388971 ; RVO:86652036 ; RVO:61388955
Keywords : TEAD1 * genomic DNA * M-CAT motifs * ChIP-qPCR * presence of M-CAT
OECD category: Biochemistry and molecular biology; Biophysics (BTO-N); Physical chemistry (UFCH-W)
Impact factor: 5.871, year: 2021
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/abs/pii/S0969212620304652?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0320930File Download Size Commentary Version Access 0543807preprint.pdf 5 2.2 MB Author´s preprint open-access - 4.0543515 - MBÚ 2022 RIV US eng J - Journal Article
Loginov, Dmitry Sergej - Fiala, Jan - Chmelík, Josef - Brechlin, P. - Kruppa, G. - Novák, Petr
Benefits of Ion Mobility Separation and Parallel Accumulation-Serial Fragmentation Technology on timsTOF Pro for the Needs of Fast Photochemical Oxidation of Protein Analysis.
ACS Omega. Roč. 6, č. 15 (2021), s. 10352-10361. ISSN 2470-1343. E-ISSN 2470-1343
R&D Projects: GA ČR(CZ) GA19-16084S; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109
EU Projects: European Commission(XE) 823839 - EPIC-XS
Research Infrastructure: CIISB II - 90127
Institutional support: RVO:61388971
Keywords : photochemical oxidation * Protein Analysis * ion mobility spectrometry * oxidative modifications
OECD category: Biochemistry and molecular biology
Impact factor: 4.132, year: 2021
Method of publishing: Open access
https://pubs.acs.org/doi/abs/10.1021/acsomega.1c00732
Permanent Link: http://hdl.handle.net/11104/0320706 - 5.0531086 - MBÚ 2020 RIV NL eng J - Journal Article
Suková, Anna - Bumba, Ladislav - Srb, Pavel - Veverka, Václav - Staněk, Ondřej - Holubová, Jana - Chmelík, Josef - Fišer, Radovan - Šebo, Peter - Mašín, Jiří
Negative charge of the AC-to-Hly linking segment modulates calcium-dependent membrane activities of Bordetella adenylate cyclase toxin.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1862, č. 9 (2020), č. článku 183310. ISSN 0005-2736. E-ISSN 1879-2642
R&D Projects: GA ČR(CZ) GA19-04607S; GA ČR(CZ) GA19-15175S; GA ČR(CZ) GA18-20621S; GA MŠMT(CZ) LO1509; GA MŠMT(CZ) LM2018133; GA MŠMT(CZ) LO1304
Institutional support: RVO:61388971 ; RVO:61388963
Keywords : Adenylate cyclase toxin * AC-to-Hly linking segment * Membrane penetration
OECD category: Biochemistry and molecular biology; Biochemistry and molecular biology (UOCHB-X)
Impact factor: 3.747, year: 2020
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0005273620301413
Permanent Link: http://hdl.handle.net/11104/0309834 - 6.0519095 - MBÚ 2020 RIV CH eng J - Journal Article
Slavata, Lukáš - Chmelík, Josef - Kavan, Daniel - Filandrová, Růžena - Fiala, Jan - Rosůlek, Michal - Mrázek, Hynek - Kukačka, Zdeněk - Vališ, Karel - Man, Petr - Miller, M. - McIntyre, W. - Fabris, D. - Novák, Petr
MS-Based Approaches Enable the Structural Characterization of Transcription Factor/DNA Response Element Complex.
Biomolecules. Roč. 9, č. 10 (2019), č. článku 535. E-ISSN 2218-273X
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LO1509
EU Projects: European Commission(XE) 731077 - EU_FT-ICR_MS; European Commission(XE) 823839 - EPIC-XS; European Commission(CZ) FP7WeNMR-261572; European Commission(CZ) H2020 West-Life 675858
Institutional support: RVO:61388971
Keywords : transcription factor * protein * protein-nucleic acid cross-linking
OECD category: Biochemistry and molecular biology
Impact factor: 4.082, year: 2019
Method of publishing: Open access
https://www.mdpi.com/2218-273X/9/10/535
Permanent Link: http://hdl.handle.net/11104/0304158File Download Size Commentary Version Access 163_MS-Based Approaches Enable the Structural Characterization.pdf 5 4 MB Publisher’s postprint require - 7.0508022 - MBÚ 2020 RIV US eng J - Journal Article
Trčka, F. - Ďurech, M. - Vaňková, Pavla - Chmelík, Josef - Martínková, V. - Hausner, Jiří - Kádek, Alan - Marcoux, J. - Klumpler, T. - Vojtěšek, B. - Müller, P. - Man, Petr
Human Stress-inducible Hsp70 Has a High Propensity to Form ATP-dependent Antiparallel Dimers That Are Differentially Regulated by Cochaperone Binding.
Molecular & Cellular Proteomics. Roč. 18, č. 2 (2019), s. 320-337. ISSN 1535-9476. E-ISSN 1535-9484
R&D Projects: GA ČR(CZ) GA16-20860S; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LO1509; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2015043
Research Infrastructure: CIISB - 90043
Institutional support: RVO:61388971
Keywords : heat-shock-protein * e3 ubiquitin ligase * substrate-binding
OECD category: Biochemistry and molecular biology
Impact factor: 4.870, year: 2019
Method of publishing: Open access
https://www.mcponline.org/content/18/2/320
Permanent Link: http://hdl.handle.net/11104/0298988File Download Size Commentary Version Access 163_Human stress-inducible Hsp70 has a high.pdf 4 7 MB Publisher’s postprint require - 8.0508013 - MBÚ 2020 RIV NL eng J - Journal Article
Hernychová, Lucie - Rosůlek, Michal - Kádek, Alan - Mareška, V. - Chmelík, Josef (ed.) - Adámková, Ljubina - Grobárová, Valeria - Šebesta, O. - Kukačka, Zdeněk - Skála, Kristián - Spiwok, V. - Černý, J. - Novák, Petr
The C-type lectin-like receptor Nkrp1b: Structural proteomics reveals features affecting protein conformation and interactions.
Journal of Proteomics. Roč. 196, MAR 30 (2019), s. 162-172. ISSN 1874-3919. E-ISSN 1876-7737
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) ED1.1.00/02.0109
Research Infrastructure: Czech-BioImaging - 90062
Institutional support: RVO:61388971
Keywords : Structural mass spectrometry * Chemical cross-linking * Ion mobility
OECD category: Microbiology
Impact factor: 3.509, year: 2019
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S187439191830397X?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0298974 - 9.0489608 - MBÚ 2019 RIV US eng J - Journal Article
Rozbeský, Daniel - Rosůlek, Michal - Kukačka, Zdeněk - Chmelík, Josef - Man, Petr - Novák, Petr
Impact of Chemical Cross-Linking on Protein Structure and Function.
Analytical Chemistry. Roč. 90, č. 2 (2018), s. 1104-1113. ISSN 0003-2700. E-ISSN 1520-6882
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LD15089; GA MŠMT(CZ) LO1509; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) BM1403
EU Projects: European Commission(CZ) BM1403
Institutional support: RVO:61388971
Keywords : TRANSFORM MASS-SPECTROMETRY * DISTANCE GEOMETRY METHOD * TOP-DOWN APPROACH
OECD category: Biochemistry and molecular biology
Impact factor: 6.350, year: 2018
Permanent Link: http://hdl.handle.net/11104/0284071File Download Size Commentary Version Access 163_Impact of Chemical Cross-Linking on Protein.pdf 3 5.5 MB Publisher’s postprint require - 10.0471360 - BFÚ 2017 RIV US eng J - Journal Article
Kadeřávek, Pavel - Zapletal, V. - Fiala, R. - Srb, P. - Padrta, P. - Přecechtělová, J. - Šoltésová, M. - Kowalewski, J. - Widmalm, G. - Chmelík, Josef - Sklenář, V. - Žídek, L.
Spectral density mapping at multiple magnetic fields suitable for C-13 NMR relaxation studies.
Journal of Magnetic Resonance. A. Roč. 266, MAY2016 (2016), s. 23-40. ISSN 1064-1858
Institutional support: RVO:68081707 ; RVO:61388971
Keywords : molecular-orbital methods * protein backbone dynamics
Subject RIV: BO - Biophysics; EE - Microbiology, Virology (MBU-M)
Permanent Link: http://hdl.handle.net/11104/0268748