Search results
- 1.0549408 - ÚEB 2022 RIV US eng J - Journal Article
Mascher, M. - Wicker, T. - Jenkins, J. - Plott, C. - Lux, T. - Koh, C. S. - Ens, J. - Gundlach, H. - Boston, L. B. - Tulpová, Zuzana - Holden, S. - Hernández-Pinzón, I. - Scholz, U. - Mayer, K. F. X. - Spannagl, M. - Pozniak, C. - Sharpe, A. J. - Šimková, Hana - Moscou, M. J. - Grimwood, J. - Schmutz, J. - Stein, N.
Long-read sequence assembly: A technical evaluation in barley.
Plant Cell. Roč. 33, č. 6 (2021), s. 1888-1906. ISSN 1040-4651. E-ISSN 1532-298X
R&D Projects: GA ČR(CZ) GA17-17564S; GA MŠMT(CZ) EF16_019/0000827; GA MŠMT(CZ) LM2015047
Institutional support: RVO:61389030
Keywords : DISEASE RESISTANCE * GENOME * ALIGNMENT
OECD category: Biochemistry and molecular biology
Impact factor: 12.085, year: 2021
Method of publishing: Open access
http://doi.org/10.1093/plcell/koab077
Permanent Link: http://hdl.handle.net/11104/0325425File Download Size Commentary Version Access 2021_Mascher_PLANT CELL_1888.pdf 1 3.7 MB Other open-access - 2.0545921 - ÚEB 2022 RIV US eng J - Journal Article
Rabanus-Wallace, M. T. - Hackauf, B. - Mascher, M. - Lux, T. - Wicker, T. - Gundlach, H. - Baez, M. - Houben, A. - Mayer, K. F. X. - Guo, L. - Poland, J. - Pozniak, C. - Walkowiak, S. - Melonek, J. - Praz, C. R. - Schreiber, M. - Budak, H. - Heuberger, M. - Steuernagel, B. - Wulff, B. - Börner, A. - Byrns, B. - Čížková, Jana - Fowler, D. - Fritz, A. - Himmelbach, A. - Kaithakottil, G. - Keilwagen, J. - Keller, B. - Konkin, D. - Larsen, J. - Li, Q. - Myśków, B. - Padmarasu, S. - Rawat, N. - Sesiz, U. - Biyiklioglu-Kaya, S. - Sharpe, A. J. - Šimková, Hana - Small, I. - Swarbreck, D. - Toegelová, Helena - Tsvetkova, N. - Voylokov, A. V. - Vrána, Jan - Bauer, E. - Bolibok-Bragoszewska, H. - Doležel, Jaroslav - Hall, A. - Jia, J. - Korzun, V. - Laroche, A. - Ma, X. F. - Ordon, F. - Özkan, H. - Rakoczy-Trojanowska, M. - Scholz, U. - Schulman, A. H. - Siekmann, G. - Stojałowski, S. - Tiwari, V.K. - Spannagl, M. - Stein, N.
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential.
Nature Genetics. Roč. 53, č. 4 (2021), s. 564-573. ISSN 1061-4036. E-ISSN 1546-1718
R&D Projects: GA ČR(CZ) GA17-17564S; GA MŠMT(CZ) EF16_019/0000827
Keywords : Chromosome Mapping * Secale * Translocation Lines
OECD category: Biochemistry and molecular biology
Impact factor: 41.376, year: 2021
Method of publishing: Open access
http://doi.org/10.1038/s41588-021-00807-0
Permanent Link: http://hdl.handle.net/11104/0322530File Download Size Commentary Version Access 2021_Rabanus-Wallace_Nature Genetics_564.pdf 1 5.1 MB Other open-access - 3.0538723 - BC 2021 RIV GB eng J - Journal Article
Hoang, P.T. N. - Fiebig, A. - Novák, Petr - Macas, Jiří - Cao, H.X. - Stepanenko, A. - Chen, G. - Borisjuk, N. - Scholz, U. - Schubert, I.
Chromosome-scale genome assembly for the duckweed Spirodela intermedia, integrating cytogenetic maps, PacBio and Oxford Nanopore libraries.
Scientific Reports. Roč. 10, č. 1 (2020), č. článku 19230. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA MŠMT(CZ) LM2015047
Institutional support: RVO:60077344
Keywords : lemna-minor * annotation * polyrhiza * sequence * evolution * l.
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 4.380, year: 2020
Method of publishing: Open access
https://www.nature.com/articles/s41598-020-75728-9
Permanent Link: http://hdl.handle.net/11104/0316459 - 4.0476491 - ÚEB 2018 RIV GB eng J - Journal Article
Beier, S. - Himmelbach, A. - Colmsee, C. - Zhang, X. Q. - Barrero, R. A. - Hastie, A. - Šimková, Hana - Staňková, Helena - Vrána, Jan - Chan, S. - Zhou, G. - Poland, J. - Bellgard, M. I. - Houben, A. - Doležel, Jaroslav - Ayling, S. - Lonardi, S. - Scholz, U. - Stein, N. - Mascher, M. … Total 60 authors
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.
Scientific Data. Roč. 4, APR 27 (2017), č. článku 170044. E-ISSN 2052-4463
R&D Projects: GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : BACTERIAL ARTIFICIAL CHROMOSOMES * PHYSICAL MAP * LIBRARIES
OECD category: Plant sciences, botany
Impact factor: 5.311, year: 2017
Permanent Link: http://hdl.handle.net/11104/0272979File Download Size Commentary Version Access 2017_Beier_SCIENTIFIC DATA_170044.pdf 5 1.6 MB Other open-access - 5.0473677 - ÚEB 2018 RIV GB eng J - Journal Article
Ma, W. - Gabriel, T.S. - Martis, M.M. - Gursinsky, T. - Schubert, V. - Vrána, Jan - Doležel, Jaroslav - Grundlach, H. - Altschmied, L. - Scholz, U. - Himmelbach, A. - Behrens, S.E. - Banaei-Moghaddam, A.M. - Houben, A.
Rye B chromosomes encode a functional Argonaute-like protein with in vitro slicer activities similar to its A chromosome paralog.
New Phytologist. Roč. 213, č. 2 (2017), s. 916-928. ISSN 0028-646X. E-ISSN 1469-8137
R&D Projects: GA MŠMT(CZ) LO1204; GA ČR GBP501/12/G090
Institutional support: RVO:61389030
Keywords : rna-polymerase-ii * ribosomal-rna * accessory chromosomes * plant argonautes * gene-expression * evolution * transcription * pseudogenes * sequences * identification * Argonaute * B chromosomes * B-located genes * gene erosion. gene expression * pseudogenization * Secale cereale
OECD category: Plant sciences, botany
Impact factor: 7.433, year: 2017
Permanent Link: http://hdl.handle.net/11104/0270807File Download Size Commentary Version Access 2017_Ma_NEW PHYTOLOGIST_904.pdf 11 1.7 MB Other open-access - 6.0461234 - ÚEB 2017 RIV US eng J - Journal Article
Fíla, Jan - Radau, S. - Matros, A. - Hartmann, A. - Scholz, U. - Feciková, Jana - Mock, H. P. - Čapková, Věra - Zahedi, R. P. - Honys, David
Phosphoproteomics Profiling of Tobacco Mature Pollen and Pollen Activated in vitro.
Molecular & Cellular Proteomics. Roč. 15, č. 4 (2016), s. 1338-1350. ISSN 1535-9476. E-ISSN 1535-9484
R&D Projects: GA ČR(CZ) GA15-16050S; GA ČR(CZ) GAP305/12/2611; GA MŠMT(CZ) LD13049; GA ČR GA15-22720S
Institutional support: RVO:61389030
Keywords : OXIDE AFFINITY-CHROMATOGRAPHY * ARABIDOPSIS-THALIANA * PROTEIN-TYROSINE PHOSPHORYLATION
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 6.540, year: 2016
Permanent Link: http://hdl.handle.net/11104/0260887File Download Size Commentary Version Access 2016_Fíla_MOLECULAR & CELLULAR PROTEOMICS_1338.pdf 4 4.3 MB Other open-access - 7.0450261 - BC 2016 RIV US eng J - Journal Article
Vu, G.T.H. - Schmutzer, T. - Bull, F. - Cao, H.X. - Fuchs, J. - Tran, T.D. - Jovtchev, G. - Pistrick, K. - Stein, N. - Pečinka, A. - Neumann, Pavel - Novák, Petr - Macas, Jiří - Dear, P.H. - Blattner, F.R. - Scholz, U. - Schubert, I.
Comparative Genome Analysis Reveals Divergent Genome Size Evolution in a Carnivorous Plant Genus.
Plant Genome. Roč. 8, č. 3 (2015). E-ISSN 1940-3372
R&D Projects: GA ČR GBP501/12/G090
Institutional support: RVO:60077344
Keywords : Genlisea * genome * repetitive sequences
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 3.509, year: 2015
Permanent Link: http://hdl.handle.net/11104/0251642 - 8.0423097 - ÚEB 2014 RIV US eng J - Journal Article
Martis, M.M. - Zhou, R. - Haseneyer, G. - Schmutzer, T. - Vrána, Jan - Kubaláková, Marie - Konig, S. - Kugler, K.G. - Scholz, U. - Hackauf, B. - Korzun, V. - Schon, C.C. - Doležel, Jaroslav - Bauer, E. - Mayer, K. F. X. - Stein, N.
Reticulate Evolution of the Rye Genome.
Plant Cell. Roč. 25, č. 10 (2013), s. 3685-3698. ISSN 1040-4651. E-ISSN 1532-298X
R&D Projects: GA ČR GBP501/12/G090
Grant - others:GA MŠk(CZ) ED0007/01/01
Program: ED
Institutional research plan: CEZ:AV0Z50380511
Keywords : SECALE-CEREALE L. * CULTIVATED RYE * PHYLOGENETIC ANALYSIS
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 9.575, year: 2013
Permanent Link: http://hdl.handle.net/11104/0229350File Download Size Commentary Version Access 2013_Martis_PLANT CELL_3685.pdf 4 1.5 MB Other open-access - 9.0381546 - BC 2013 RIV US eng J - Journal Article
Martis, M.M. - Klemme, S. - Banaei-Moghaddam, A.M. - Blattner, F.R. - Macas, Jiří - Schmutzer, T. - Scholz, U. - Gundlach, H. - Wicker, T. - Šimková, Hana - Novák, Petr - Neumann, Pavel - Kubaláková, Marie - Bauer, E. - Haseneyer, G. - Fuchs, J. - Doležel, Jaroslav - Stein, N. - Mayer, K.F.X. - Houben, A.
Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences.
Proceedings of the National Academy of Sciences of the United States of America. Roč. 109, č. 33 (2012), s. 13343-13346. ISSN 0027-8424. E-ISSN 1091-6490
R&D Projects: GA ČR GBP501/12/G090; GA MŠMT(CZ) OC10037
Institutional research plan: CEZ:AV0Z50510513
Institutional support: RVO:60077344 ; RVO:61389030
Keywords : FULL-LENGTH CDNAS * SECALE-CEREALE L. * B-CHROMOSOMES * REPETITIVE SEQUENCES
Subject RIV: EB - Genetics ; Molecular Biology; EB - Genetics ; Molecular Biology (UEB-Q)
Impact factor: 9.737, year: 2012
Permanent Link: http://hdl.handle.net/11104/0215623File Download Size Commentary Version Access 0381546_Martis.pdf 9 434.9 KB Other open-access - 10.0330512 - ÚEB 2010 RIV US eng J - Journal Article
Mayer, K. F. X. - Taudien, S. - Martis, M. - Šimková, Hana - Suchánková, Pavla - Gundlach, H. - Wicker, T. - Petzold, A. - Felder, M. - Steuernagel, B. - Scholz, U. - Graner, A. - Platzer, M. - Doležel, Jaroslav - Stein, N.
Gene Content and Virtual Gene Order of Barley Chromosome 1H1,[C],[W],[OA].
[Obsah genů a virtuální pořadí genů na chromozómu 1H ječmene.]
Plant Physiology. Roč. 151, č. 2 (2009), s. 496-505. ISSN 0032-0889. E-ISSN 1532-2548
R&D Projects: GA MŠMT(CZ) LC06004
Institutional research plan: CEZ:AV0Z50380511
Keywords : WHOLE-GENOME AMPLIFICATION * RICE GENOME * DNA
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 6.235, year: 2009
Permanent Link: http://hdl.handle.net/11104/0176288