Search results
- 1.0549408 - ÚEB 2022 RIV US eng J - Journal Article
Mascher, M. - Wicker, T. - Jenkins, J. - Plott, C. - Lux, T. - Koh, C. S. - Ens, J. - Gundlach, H. - Boston, L. B. - Tulpová, Zuzana - Holden, S. - Hernández-Pinzón, I. - Scholz, U. - Mayer, K. F. X. - Spannagl, M. - Pozniak, C. - Sharpe, A. J. - Šimková, Hana - Moscou, M. J. - Grimwood, J. - Schmutz, J. - Stein, N.
Long-read sequence assembly: A technical evaluation in barley.
Plant Cell. Roč. 33, č. 6 (2021), s. 1888-1906. ISSN 1040-4651. E-ISSN 1532-298X
R&D Projects: GA ČR(CZ) GA17-17564S; GA MŠMT(CZ) EF16_019/0000827; GA MŠMT(CZ) LM2015047
Institutional support: RVO:61389030
Keywords : DISEASE RESISTANCE * GENOME * ALIGNMENT
OECD category: Biochemistry and molecular biology
Impact factor: 12.085, year: 2021
Method of publishing: Open access
http://doi.org/10.1093/plcell/koab077
Permanent Link: http://hdl.handle.net/11104/0325425File Download Size Commentary Version Access 2021_Mascher_PLANT CELL_1888.pdf 1 3.7 MB Other open-access - 2.0545921 - ÚEB 2022 RIV US eng J - Journal Article
Rabanus-Wallace, M. T. - Hackauf, B. - Mascher, M. - Lux, T. - Wicker, T. - Gundlach, H. - Baez, M. - Houben, A. - Mayer, K. F. X. - Guo, L. - Poland, J. - Pozniak, C. - Walkowiak, S. - Melonek, J. - Praz, C. R. - Schreiber, M. - Budak, H. - Heuberger, M. - Steuernagel, B. - Wulff, B. - Börner, A. - Byrns, B. - Čížková, Jana - Fowler, D. - Fritz, A. - Himmelbach, A. - Kaithakottil, G. - Keilwagen, J. - Keller, B. - Konkin, D. - Larsen, J. - Li, Q. - Myśków, B. - Padmarasu, S. - Rawat, N. - Sesiz, U. - Biyiklioglu-Kaya, S. - Sharpe, A. J. - Šimková, Hana - Small, I. - Swarbreck, D. - Toegelová, Helena - Tsvetkova, N. - Voylokov, A. V. - Vrána, Jan - Bauer, E. - Bolibok-Bragoszewska, H. - Doležel, Jaroslav - Hall, A. - Jia, J. - Korzun, V. - Laroche, A. - Ma, X. F. - Ordon, F. - Özkan, H. - Rakoczy-Trojanowska, M. - Scholz, U. - Schulman, A. H. - Siekmann, G. - Stojałowski, S. - Tiwari, V.K. - Spannagl, M. - Stein, N.
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential.
Nature Genetics. Roč. 53, č. 4 (2021), s. 564-573. ISSN 1061-4036. E-ISSN 1546-1718
R&D Projects: GA ČR(CZ) GA17-17564S; GA MŠMT(CZ) EF16_019/0000827
Keywords : Chromosome Mapping * Secale * Translocation Lines
OECD category: Biochemistry and molecular biology
Impact factor: 41.376, year: 2021
Method of publishing: Open access
http://doi.org/10.1038/s41588-021-00807-0
Permanent Link: http://hdl.handle.net/11104/0322530File Download Size Commentary Version Access 2021_Rabanus-Wallace_Nature Genetics_564.pdf 1 5.1 MB Other open-access - 3.0545912 - ÚEB 2022 RIV GB eng J - Journal Article
Sánchez-Martín, J. - Widrig, V. - Herren, G. - Wicker, T. - Zbinden, H. - Gronnier, J. - Spörri, L. - Praz, C. R. - Heuberger, M. - Kolodziej, M. C. - Isaksson, J. - Steuernagel, B. - Karafiátová, Miroslava - Doležel, Jaroslav - Zipfel, C. - Keller, B.
Wheat Pm4 resistance to powdery mildew is controlled by alternative splice variants encoding chimeric proteins.
Nature Plants. Roč. 7, č. 3 (2021), s. 327-341. ISSN 2055-026X. E-ISSN 2055-0278
R&D Projects: GA MŠMT(CZ) EF16_019/0000827
Institutional support: RVO:61389030
Keywords : PROGRAMMED CELL-DEATH * DISEASE-RESISTANCE * PHOSPHOMANNOSE ISOMERASE
OECD category: Biochemistry and molecular biology
Impact factor: 17.352, year: 2021
Method of publishing: Open access
http://doi.org/10.1038/s41477-021-00869-2
Permanent Link: http://hdl.handle.net/11104/0322524File Download Size Commentary Version Access 2021_Sánchez-Martín_Nature Plants_327.pdf 1 4.9 MB Other open-access - 4.0545765 - ÚEB 2022 RIV GB eng J - Journal Article
Kolodziej, M. C. - Singla, J. - Sánchez-Martín, J. - Zbinden, H. - Šimková, Hana - Karafiátová, Miroslava - Doležel, Jaroslav - Gronnier, J. - Poretti, M. - Glauser, R. - Zhu, W. - Köster, P. - Zipfel, C. - Wicker, T. - Krattinger, S.G. - Keller, B.
A membrane-bound ankyrin repeat protein confers race-specific leaf rust disease resistance in wheat.
Nature Communications. Roč. 12, č. 1 (2021), č. článku 956. E-ISSN 2041-1723
R&D Projects: GA MŠMT(CZ) EF16_019/0000827
Institutional support: RVO:61389030
Keywords : Triticum aestivum * gene expression regulation * disease resistance
OECD category: Biochemistry and molecular biology
Impact factor: 17.694, year: 2021
Method of publishing: Open access
http://doi.org/10.1038/s41467-020-20777-x
Permanent Link: http://hdl.handle.net/11104/0322490File Download Size Commentary Version Access 2021_Kolodziej_Nature Communications_956.pdf 1 2.9 MB Other open-access - 5.0532928 - ÚEB 2021 RIV GB eng J - Journal Article
Abrouk, M. - Ahmed, H. I. - Cubry, P. - Šimoníková, Denisa - Cauet, S. - Pailles, Y. - Bettgenhaeuser, J. - Gapa, L. - Scarcelli, N. - Couderc, M. - Zekraoui, L. - Kathiresan, N. - Čížková, Jana - Hřibová, Eva - Doležel, Jaroslav - Arribat, S. - Bergès, H. - Wieringa, J. J. - Gueye, M. - Kane, N. A. - Leclerc, C. - Causse, S. - Vancoppenolle, S. - Billot, C. - Wicker, T. - Vigouroux, A. - Barnaud, A. - Krattinger, S.G.
Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate.
Nature Communications. Roč. 11, č. 1 (2020), č. článku 4488. E-ISSN 2041-1723
R&D Projects: GA MŠMT(CZ) EF16_019/0000827
Institutional support: RVO:61389030
Keywords : climate change * crop plant * dryland farming
OECD category: Biochemistry and molecular biology
Impact factor: 14.919, year: 2020
Method of publishing: Open access
http://doi.org/10.1038/s41467-020-18329-4
Permanent Link: http://hdl.handle.net/11104/0311307File Download Size Commentary Version Access 2020_Abrouk_Nature Communications_4488.pdf 1 3 MB Other open-access - 6.0482335 - ÚEB 2018 RIV US eng J - Journal Article
Thind, A. K. - Wicker, T. - Šimková, Hana - Fossati, D. - Moullet, O. - Brabant, C. - Vrána, Jan - Doležel, Jaroslav - Krattinger, S.G.
Rapid cloning of genes in hexaploid wheat using cultivar-specific long-range chromosome assembly.
Nature Biotechnology. Roč. 35, č. 8 (2017), s. 793-796. ISSN 1087-0156. E-ISSN 1546-1696
R&D Projects: GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : adult-plant resistance * leaf rust * sequence capture * genome * arabidopsis * virulence * barley * canada * locus * lr22a
OECD category: Plant sciences, botany
Impact factor: 35.724, year: 2017
Permanent Link: http://hdl.handle.net/11104/0277748File Download Size Commentary Version Access 2017_Thind_NATURE BIOTECHNOLOGY_793.pdf 7 2.8 MB Other open-access - 7.0476487 - ÚEB 2018 RIV GB eng J - Journal Article
Mascher, M. - Gundlach, H. - Himmelbach, A. - Beier, S. - Twardziok, S. O. - Wicker, T. - Šimková, Hana - Staňková, Helena - Vrána, Jan - Chan, S. - Munoz-Amatrian, M. - Houben, A. - Doležel, Jaroslav - Ayling, S. - Lonardi, S. - Mayer, K.F.X. - Zhang, G. - Braumann, I. - Spannagl, M. - Li, C. - Waugh, R. - Stein, N. … Total 76 authors
A chromosome conformation capture ordered sequence of the barley genome.
Nature. Roč. 544, č. 7651 (2017), s. 427-433. ISSN 0028-0836. E-ISSN 1476-4687
R&D Projects: GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : bacterial artificial chromosomes * inverted-repeat elements * complex-plant genomes * hi-c * environmental adaptation * ltr retrotransposons * structural variation * maize genome * software * database
OECD category: Plant sciences, botany
Impact factor: 41.577, year: 2017
Permanent Link: http://hdl.handle.net/11104/0272975File Download Size Commentary Version Access 2017_Mascher_NATURE_426.pdf 2 7.2 MB Other open-access - 8.0465513 - ÚEB 2017 RIV US eng J - Journal Article
Sanchez-Martin, J. - Steuernagel, B. - Ghosh, S. - Herren, G. - Hurni, S. - Adamski, N. - Vrána, Jan - Kubaláková, Marie - Krattinger, S.G. - Wicker, T. - Doležel, Jaroslav - Keller, B. - Wulff, B. B. H.
Rapid gene isolation in barley and wheat by mutant chromosome sequencing.
Genome Biology. Roč. 17, OCT 31 (2016), č. článku 221. ISSN 1465-6906
R&D Projects: GA ČR GBP501/12/G090; GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : induced mutations * mitotic chromosomes * confers resistance * exome capture * genome * identification * evolution * pathogens * hordeum * MutChromSeq * Gene cloning * Mutational genomics * Chromosome flow sorting * Triticeae * Wheat * Barley
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 11.313, year: 2015
Permanent Link: http://hdl.handle.net/11104/0264045File Download Size Commentary Version Access 2016_Sanchez-Martin_GENOME BIOLOGY_221.pdf 8 1.4 MB Other open-access - 9.0423119 - ÚEB 2014 RIV US eng J - Journal Article
Breen, J. - Wicker, T. - Shatalina, M. - Frenkel, Z. - Bertin, I. - Philippe, R. - Spielmeyer, W. - Šimková, Hana - Šafář, Jan - Cattonaro, F. - Scalabrin, S. - Magni, F. - Vautrin, S. - Berges, H. - Paux, E. - Fahima, T. - Doležel, Jaroslav - Korol, A. - Feuillet, C. - Keller, B.
A Physical Map of the Short Arm of Wheat Chromosome 1A.
PLoS ONE. Roč. 8, č. 11 (2013). ISSN 1932-6203. E-ISSN 1932-6203
Institutional research plan: CEZ:AV0Z50380511
Keywords : TRITICUM-AESTIVUM L. * EXPRESSED SEQUENCE TAGS * WEIGHT GLUTENIN LOCI
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 3.534, year: 2013
Permanent Link: http://hdl.handle.net/11104/0229355File Download Size Commentary Version Access 2013_Breen_PLOS ONE_e80272.pdf 0 2.1 MB Other open-access - 10.0399578 - ÚEB 2014 RIV US eng J - Journal Article
Wicker, T. - Oberhaensli, S. - Parlange, F. - Buchmann, J. - Shatalina, M. - Roffler, S. - Ben-David, R. - Doležel, Jaroslav - Šimková, Hana - Schulze-Lefert, P. - Keller, B. … Total 18 authors
The wheat powdery mildew genome shows the unique evolution of an obligate biotroph.
Nature Genetics. Roč. 45, č. 9 (2013), s. 1092-1098. ISSN 1061-4036. E-ISSN 1546-1718
Institutional research plan: CEZ:AV0Z50380511
Keywords : EFFECTOR CANDIDATES * PATHOGEN * BLUMERIA-GRAMINIS
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 29.648, year: 2013
Permanent Link: http://hdl.handle.net/11104/0226913File Download Size Commentary Version Access 2013_Wicker_NATURE GENETICS_1092.pdf 5 879.5 KB Other open-access