Search results
- 1.0441414 - MBÚ 2015 RIV GB eng J - Journal Article
Pánek, Josef - Krásný, Libor - Bobek, Jan - Ježková, Edita - Korelusová, Jana - Vohradský, Jiří
The suboptimal structures find the optimal RNAs: homology search for bacterial non-coding RNAs using suboptimal RNA structures.
Nucleic Acids Research. Roč. 39, č. 8 (2011), s. 3418-3426. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR GA303/09/0475; GA ČR GA310/07/1009; GA ČR GAP302/10/0468; GA MŠMT 2B06065
Institutional support: RVO:61388971
Keywords : RNA * homology * structure
Subject RIV: EE - Microbiology, Virology
Impact factor: 8.026, year: 2011
Permanent Link: http://hdl.handle.net/11104/0244424 - 2.0390219 - MBÚ 2014 RIV US eng J - Journal Article
Straková, Eva - Bobek, Jan - Ziková, Alice - Řehulka, P. - Benada, Oldřich - Řehulková, H. - Kofroňová, Olga - Vohradský, Jiří
Systems Insight into the Spore Germination of Streptomyces coelicolor.
Journal of Proteome Research. Roč. 12, č. 1 (2013), s. 517-528. ISSN 1535-3893. E-ISSN 1535-3907
R&D Projects: GA ČR GAP302/11/0229; GA ČR GAP302/10/0468; GA ČR GA310/07/1009
Institutional support: RVO:61388971
Keywords : germination * differentiation * protein expression
Subject RIV: EE - Microbiology, Virology
Impact factor: 5.001, year: 2013
Permanent Link: http://hdl.handle.net/11104/0221397 - 3.0371869 - MBÚ 2012 RIV GB eng J - Journal Article
Mikulík, Karel - Bobek, Jan - Ziková, Alice - Smětáková, Magdalena - Bezoušková, Silvia
Phosphorylation of ribosomal proteins influences subunit association and translation of poly (U) in Streptomyces coelicolor.
Molecular BioSystems. Roč. 7, č. 3 (2011), s. 817-823. ISSN 1742-206X
R&D Projects: GA ČR GAP302/10/0468; GA ČR GA303/09/0475; GA ČR GA310/07/1009; GA AV ČR(CZ) IAA500110805
Institutional research plan: CEZ:AV0Z50200510
Keywords : ESCHERICHIA-COLI RIBOSOME * ELONGATION-FACTOR-G * MESSENGER-RNA
Subject RIV: EE - Microbiology, Virology
Impact factor: 3.534, year: 2011
Permanent Link: http://hdl.handle.net/11104/0205288 - 4.0367428 - MBÚ 2012 RIV US eng J - Journal Article
Vohradská, E. - Vohradský, Jiří
Virtual Mutagenesis of the Yeast Cyclins Genetic Network Reveals Complex Dynamics of Transcriptional Control Networks.
PLoS ONE. Roč. 6, č. 4 (2011), s. 1-9. ISSN 1932-6203. E-ISSN 1932-6203
R&D Projects: GA ČR GA310/07/1009; GA ČR GAP302/11/0229
Institutional research plan: CEZ:AV0Z50200510
Keywords : REGULATORY NETWORKS * SACCHAROMYCES-CEREVISIAE * CELL-CYCLE
Subject RIV: EE - Microbiology, Virology
Impact factor: 4.092, year: 2011
Permanent Link: http://hdl.handle.net/11104/0202124 - 5.0354394 - MBÚ 2011 RIV GB eng J - Journal Article
Pánek, Josef - Krásný, Libor - Bobek, Jan - Ježková, E. - Korelusová, Jana - Vohradský, Jiří
The suboptimal structures find the optimal RNAs: homology search for bacterial non-coding RNAsusing suboptimal RNA structures.
Nucleic Acids Research. -, - (2010), s. 1-9. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT 2B06065; GA ČR GA303/09/0475; GA ČR GA310/07/1009
Institutional research plan: CEZ:AV0Z50200510
Keywords : ncRNAs * RNA structures
Subject RIV: EE - Microbiology, Virology
Impact factor: 7.836, year: 2010
Permanent Link: http://hdl.handle.net/11104/0193405 - 6.0351526 - MBÚ 2011 RIV US eng J - Journal Article
To, C. Ch. - Vohradský, Jiří
Measurement variation determines the gene network topology reconstructed from experimental data: a case study of the yeast cyclin network.
FASEB Journal. Roč. 24, č. 9 (2010), s. 3468-3478. ISSN 0892-6638. E-ISSN 1530-6860
R&D Projects: GA ČR GA310/07/1009
Institutional research plan: CEZ:AV0Z50200510
Keywords : numerical modeling * genetic programming * cell-cycle
Subject RIV: EE - Microbiology, Virology
Impact factor: 6.515, year: 2010
Permanent Link: http://hdl.handle.net/11104/0191261 - 7.0351524 - MBÚ 2011 RIV GB eng J - Journal Article
Vohradský, Jiří - Pánek, Josef - Vomastek, Tomáš
Numerical modelling of microRNA-mediated mRNA decay identifies novel mechanism of microRNA controlled mRNA downregulation.
Nucleic Acids Research. Roč. 38, č. 14 (2010), s. 4579-4585. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR GA310/07/1009; GA ČR GA303/09/0475; GA AV ČR IAA500200716
Institutional research plan: CEZ:AV0Z50200510
Keywords : GENE-REGULATION * TRANSLATIONAL REPRESSION * TARGET PREDICTIONS
Subject RIV: EE - Microbiology, Virology
Impact factor: 7.836, year: 2010
Permanent Link: http://hdl.handle.net/11104/0191260 - 8.0334831 - MBÚ 2010 RIV US eng J - Journal Article
Vu, Thi Tra - Vohradský, Jiří
Inference of active transcriptional networks by integration of gene expression kinetics modeling and multisource data.
Genomics. Roč. 93, č. 5 (2009), s. 426-433. ISSN 0888-7543. E-ISSN 1089-8646
R&D Projects: GA ČR GA310/07/1009
Institutional research plan: CEZ:AV0Z50200510
Keywords : Genetic networks * Gene expression modeling * Saccharomyces cerevisiae
Subject RIV: EE - Microbiology, Virology
Impact factor: 3.327, year: 2009
Permanent Link: http://hdl.handle.net/11104/0179458 - 9.0320412 - MBÚ 2009 RIV GB eng J - Journal Article
Palečková, Petra - Bobek, Jan - Mikulík, Karel
tmRNA of Streptomyces collinus and Streptomyces griseus during the growth and in the presence of antibiotics.
[tmRNA Strepromyces collinus a Streptomyces griseus v průběhu růstu a v přítomnosti antibiotik.]
Microbial Biotechnology. Roč. 2, č. 1 (2009), s. 114-122. ISSN 1751-7907
R&D Projects: GA ČR GA203/05/0106; GA ČR GA310/07/1009
Grant - others:XE(XE) EC Integrated project ActinoGEN LSHM-2004-005224
Institutional research plan: CEZ:AV0Z50200510
Keywords : tmrna * antibiotics * protein synthesis
Subject RIV: EE - Microbiology, Virology
Permanent Link: http://hdl.handle.net/11104/0169301 - 10.0313104 - MBÚ 2009 RIV GB eng J - Journal Article
To, Cuong - Vohradský, Jiří
Supervised inference of gene-regulatory networks.
[Kontrolovaná předpověď genových regulačních sítí.]
BMC Bioinformatics. Roč. 9, č. 2 (2008), s. 1-14. ISSN 1471-2105. E-ISSN 1471-2105
R&D Projects: GA ČR GA310/04/0804; GA ČR GA310/07/1009
Grant - others:XE(XE) EC Integrated Project ActinoGEN, LSHM-CT-2004-005224
Institutional research plan: CEZ:AV0Z50200510
Keywords : gene-regulatory networks * gene expression * computational biology
Subject RIV: IN - Informatics, Computer Science
Impact factor: 3.781, year: 2008
Permanent Link: http://hdl.handle.net/11104/0164017