Search results
- 1.0391734 - ÚOCHB 2014 RIV AT eng J - Journal Article
Hlaváček, Jan
Oostatic peptides.
Amino Acids. Roč. 44, č. 4 (2013), s. 1095-1105. ISSN 0939-4451. E-ISSN 1438-2199
R&D Projects: GA ČR GA203/06/1727
Institutional support: RVO:61388963
Keywords : insect development regulation * oostatic activity * TMOF and analogs * genetic approach * degradation in ovaries
Subject RIV: CE - Biochemistry
Impact factor: 3.653, year: 2013
Permanent Link: http://hdl.handle.net/11104/0220720 - 2.0353281 - ÚOCHB 2011 RIV DE eng J - Journal Article
Kolář, Michal - Berka, K. - Jurečka, P. - Hobza, P.
On the Reliability of the AMBER Force Field and its Empirical Dispersion Contribution for the Description of Noncovalent Complexes.
ChemPhysChem. Roč. 11, č. 11 (2010), s. 2399-2408. ISSN 1439-4235. E-ISSN 1439-7641
R&D Projects: GA MŠMT LC512; GA ČR GA203/06/1727
Institutional research plan: CEZ:AV0Z40550506
Keywords : dispersion energy * SAPT * noncovalent complex
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 3.339, year: 2010
Permanent Link: http://hdl.handle.net/11104/0192571 - 3.0353245 - ÚOCHB 2011 RIV US eng J - Journal Article
Kolář, Michal - Kubař, T. - Hobza, Pavel
Sequence-Dependent Configurational Entropy Change of DNA upon Intercalation.
Journal of Physical Chemistry B. Roč. 114, č. 42 (2010), s. 13446-13454. ISSN 1520-6106. E-ISSN 1520-5207
R&D Projects: GA MŠMT LC512; GA ČR GA203/06/1727
Institutional research plan: CEZ:AV0Z40550506
Keywords : configurational entropy * dna...ligand binding * molecular dynamic
Subject RIV: CC - Organic Chemistry
Impact factor: 3.603, year: 2010
Permanent Link: http://hdl.handle.net/11104/0006224 - 4.0336385 - ÚOCHB 2010 RIV GB eng J - Journal Article
Heyda, Jan - Pokorná, Jana - Vrbka, Luboš - Vácha, Robert - Jagoda-Cwiklik, B. - Konvalinka, Jan - Jungwirth, Pavel - Vondrášek, Jiří
Ion specific effects of sodium and potassium on the catalytic activity of HIV-1 protease.
Physical Chemistry Chemical Physics. Roč. 11, č. 35 (2009), s. 7599-7604. ISSN 1463-9076. E-ISSN 1463-9084
R&D Projects: GA MŠMT LC512; GA MŠMT 1M0508; GA ČR GA203/08/0114; GA ČR GA203/06/1727
Institutional research plan: CEZ:AV0Z40550506
Keywords : HIV-1 protease * ion-protein interaction * Hofmeister series
Subject RIV: CE - Biochemistry
Impact factor: 4.116, year: 2009
Permanent Link: http://hdl.handle.net/11104/0180627 - 5.0327972 - ÚOCHB 2010 RIV DE eng J - Journal Article
Berka, Karel - Hobza, Pavel - Vondrášek, Jiří
Analysis of Energy Stabilization inside the Hydrophobic Core of Rubredoxin.
ChemPhysChem. Roč. 10, č. 3 (2009), s. 543-548. ISSN 1439-4235. E-ISSN 1439-7641
R&D Projects: GA ČR GA203/05/0009; GA ČR GA203/06/1727; GA ČR(CZ) GD203/05/H001; GA AV ČR IAA400550510; GA MŠMT LC512
Institutional research plan: CEZ:AV0Z40550506
Keywords : hydrophobic core * protein stability * SAPT method
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 3.453, year: 2009
Permanent Link: http://hdl.handle.net/11104/0174393 - 6.0324791 - BTÚ 2009 RIV US eng J - Journal Article
Černý, Jiří - Vondrášek, Jiří - Hobza, Pavel
Loss of dispersion energy changes the stability and folding/unfolding equilibrium of the Trp-Cage protein.
[Ztráta disperzní energie má vliv na stabilitu a nativní/denaturovaný rovnovážný stav Trp-Cage proteinu.]
Journal of Physical Chemistry B. Roč. 113, č. 16 (2009), s. 5657-5660. ISSN 1520-6106. E-ISSN 1520-5207
R&D Projects: GA MŠMT LC512; GA ČR GA203/06/1727
Institutional research plan: CEZ:AV0Z40550506; CEZ:AV0Z50520701
Keywords : Trp-Cage protein * dispersion energy * protein folding
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 3.471, year: 2009
Permanent Link: http://hdl.handle.net/11104/0005206 - 7.0322805 - ÚOCHB 2009 RIV US eng J - Journal Article
Kumprecht, Lukáš - Buděšínský, Miloš - Vondrášek, Jiří - Vymětal, Jiří - Černý, Jiří - Císařová, I. - Brynda, Jiří - Herzig, Vladimír - Koutník, Petr - Závada, Jiří - Kraus, Tomáš
Rigid duplex alpha-cyclodextrin reversibly connected with disulfide bonds. Synthesis and inclusion complexes.
[Rigidní alfa-cyklodextrinový duplex reversibilně spojený disulfidovými vazbami. Syntéza a inkluzní komplexy.]
Journal of Organic Chemistry. Roč. 74, č. 3 (2009), s. 1082-1092. ISSN 0022-3263. E-ISSN 1520-6904
R&D Projects: GA AV ČR IAA400550810; GA ČR GA203/06/1550; GA ČR GA203/06/1727; GA MŠMT LC512; GA MŠMT OC 172
Institutional research plan: CEZ:AV0Z40550506
Keywords : cyclodextrins * dynamic covalent bonds * calorimetry
Subject RIV: CC - Organic Chemistry
Impact factor: 4.219, year: 2009
Permanent Link: http://hdl.handle.net/11104/0170961 - 8.0315508 - ÚOCHB 2009 RIV US eng J - Journal Article
Chalupský, Jakub - Vondrášek, Jiří - Špirko, Vladimír
Quasiplanarity of the peptide bond.
[Kvaziplanarita peptidové vazby.]
Journal of Physical Chemistry A. Roč. 112, č. 4 (2008), s. 693-699. ISSN 1089-5639. E-ISSN 1520-5215
R&D Projects: GA MŠMT LC512; GA ČR GA203/06/0420; GA ČR GA203/06/1727; GA AV ČR IAA400550702
Institutional research plan: CEZ:AV0Z40550506
Keywords : coupled-cluster singles * gas electron-diffraction * alanyl-L-alanine * molecular structure * microwawe spectrum
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 2.871, year: 2008
Permanent Link: http://hdl.handle.net/11104/0004880 - 9.0315432 - ÚOCHB 2009 RIV DK eng J - Journal Article
Vymětal, Jiří - Slabý, I. - Spahr, A. - Vondrášek, Jiří - Lyngstadaas, S. P.
Bioinformatic analysis and molecular modelling of human ameloblastin suggest a two-domain intrinsically unstructured calcium-binding protein.
[Bioinformatická analýza a molekulární modelování lidského ameloblastinu naznačují že jde o dvoudoménový nestruktrurovaný protein za normálních podmínek.]
European Journal of Oral Sciences. Roč. 116, č. 2 (2008), s. 124-134. ISSN 0909-8836. E-ISSN 1600-0722
R&D Projects: GA ČR GA203/05/0009; GA ČR GA203/06/1727; GA MŠMT LC512
Grant - others:EU(XE) QLK3-CT-2001-00090
Institutional research plan: CEZ:AV0Z40550506
Keywords : ameloblastin * bioinformatic modelling * calcium * intrinsically unstructured protein
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 1.957, year: 2008
Permanent Link: http://hdl.handle.net/11104/0165636 - 10.0315418 - ÚOCHB 2009 RIV CZ eng J - Journal Article
Řezáč, Jan - Berka, Karel - Horinek, D. - Hobza, Pavel - Vondrášek, Jiří
The stabilization energy of the Glu-Lys salt bridge in the protein/water environment: Correlated quantum chemical ab initio, DFT and empirical potential studies.
[Stabilizační energie iontového páru Glu-Lys pro protein ve vodném prostředí: studie pomocí metod kvantové chemie, DFT a empirického potenciálu.]
Collection of Czechoslovak Chemical Communications. Roč. 73, 6/7 (2008), s. 921-936. ISSN 0010-0765
R&D Projects: GA AV ČR IAA400550510; GA ČR GA203/06/1727; GA MŠMT LC512
Institutional research plan: CEZ:AV0Z40550506
Keywords : salt bridges * ion pairs * protein stabilization * interaction energies * protein dielectric
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 0.784, year: 2008
Permanent Link: http://hdl.handle.net/11104/0165624