Search results
- 1.0575407 - BC 2024 RIV NL eng J - Journal Article
Záhonová, Kristýna - Valach, M. - Tripathi, Pragya - Benz, Corinna - Opperdoes, F. R. - Baráth, P. - Lukáčová, V. - Danchenko, M. - Faktorová, Drahomíra - Horváth, A. - Burger, G. - Lukeš, Julius - Škodová-Sveráková, Ingrid
Subunit composition of mitochondrial dehydrogenase complexes in diplonemid flagellates.
Biochimica et Biophysica Acta-General Subjects. Roč. 1867, č. 9 (2023), č. článku 130419. ISSN 0304-4165. E-ISSN 1872-8006
R&D Projects: GA ČR(CZ) GX23-06479X; GA MŠMT(CZ) EF16_019/0000759
Grant - others:Gordon and Betty Moore Foundation(US) #9354
Program: Science
Institutional support: RVO:60077344
Keywords : Dehydrogenase complexes * Evolution * Diplonema papillatum * Diplonemids * Protist * Mitochondrion
OECD category: Cell biology
Impact factor: 3, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0304416523001174?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0345272 - 2.0574463 - BC 2024 RIV US eng J - Journal Article
Valach, M. - Benz, Corinna - Aguilar, L.C. - Gahura, Ondřej - Faktorová, Drahomíra - Zíková, Alena - Oeffinger, M. - Burger, G. - Gray, M.W. - Lukeš, Julius
Miniature RNAs are embedded in an exceptionally protein-rich mitoribosome via an elaborate assembly pathway.
Nucleic Acids Research. Roč. 51, č. 12 (2023), s. 6443-6460. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GX23-06479X; GA ČR(CZ) GJ20-04150Y; GA MŠMT(CZ) EF16_019/0000759
EU Projects: European Commission(XE) 101044951 - MitoSignal
Grant - others:Gordon and Betty Moore Foundation(US) GBMF9354
Institutional support: RVO:60077344
Keywords : RNAs * protein-rich mitoribosome
OECD category: Microbiology
Impact factor: 14.9, year: 2022
Method of publishing: Open access
https://academic.oup.com/nar/article/51/12/6443/7173778?login=true
Permanent Link: https://hdl.handle.net/11104/0344803File Download Size Commentary Version Access Valach_2023_NucAcidRes.pdf 4 2.3 MB Publisher’s postprint open-access - 3.0572381 - BC 2024 RIV GB eng J - Journal Article
Valach, M. - Moreira, S. - Petitjean, C. - Benz, Corinna - Butenko, Anzhelika - Flegontova, Olga - Nenarokova, Anna - Prokopchuk, Galina - Batstone, T. - Lapébie, P. - Lemogo, L. - Sarrasin, M. - Stretenowich, P. - Tripathi, Pragya - Yazaki, E. - Nara, T. - Henrissat, B. - Lang, B.F. - Gray, M.W. - Williams, T.A. - Lukeš, Julius - Burger, G.
Recent expansion of metabolic versatility in Diplonema papillatum, the model species of a highly speciose group of marine eukaryotes.
BMC BIOLOGY. Roč. 21, č. 1 (2023), č. článku 99. E-ISSN 1741-7007
R&D Projects: GA MŠMT(CZ) EF16_019/0000759; GA ČR(CZ) GA20-07186S; GA ČR(CZ) GX23-06479X; GA ČR(CZ) GA23-07695S
Grant - others:Gordon and Betty Moore Foundation(US) #9354
Program: Science
Institutional support: RVO:60077344
Keywords : Paradiplonema papillatum * Protists * Genome * Transcriptome * Proteome * Gene-family evolution * Lateral gene transfer * CAZymes * Feeding strategy * Geographical distribution * Ecological distribution
OECD category: Microbiology
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-023-01563-9
Permanent Link: https://hdl.handle.net/11104/0344455 - 4.0559941 - ÚMG 2023 RIV GB eng J - Journal Article
Gray, M.W. - Burger, G. - Derelle, R. - Klimeš, V. - Leger, M.M. - Sarrasin, M. - Vlček, Čestmír - Roger, A. J. - Eliáš, M. - Lang, B.F.
The draft nuclear genome sequence and predicted mitochondrial proteome of Andalucia godoyi, a protist with the most gene-rich and bacteria-like mitochondrial genome.
BMC BIOLOGY. Roč. 18, č. 1 (2020), č. článku 22. E-ISSN 1741-7007
Institutional support: RVO:68378050
Keywords : Mitochondrion * Mitochondrial genome * Mitochondrial proteome * Mitochondrial evolution * Protist * Jakobids * Andalucia godoyi
OECD category: Cell biology
Impact factor: 7.431, year: 2020
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-020-0741-6
Permanent Link: https://hdl.handle.net/11104/0333061 - 5.0554256 - BC 2022 RIV US eng J - Journal Article
Lax, G. - Kolísko, Martin - Eglit, Y. - Lee, W. - Yubuki, N. - Karnkowska, A. - Leander, B. S. - Burger, G. - Keeling, P. J. - Simpson, A.
Multigene phylogenetics of euglenids based on single-cell transcriptomics of diverse phagotrophs.
Molecular Phylogenetics and Evolution. Roč. 159, JUN 2021 (2021), č. článku 107088. ISSN 1055-7903. E-ISSN 1095-9513
Institutional support: RVO:60077344
Keywords : living heterotrophic euglenids * ssu rdna data * character evolution * postgaardi-mariagerensis * feeding apparatus * n. gen. * ultrastructure * euglenozoa * position * software * Cell motility * Euglenozoa * Phylogenomics * Protozoa * Spirocuta * Symbiontida
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 5.019, year: 2021
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S105579032100021X?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0328876 - 6.0538265 - BC 2021 RIV GB eng J - Journal Article
Kaur, Binnypreet - Záhonová, Kristýna - Valach, M. - Faktorová, Drahomíra - Prokopchuk, Galina - Burger, G. - Lukeš, Julius
Gene fragmentation and RNA editing without borders: eccentric mitochondrial genomes of diplonemids.
Nucleic Acids Research. Roč. 48, č. 5 (2020), s. 2694-2708. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759
Grant - others:Gordon and Betty Moore Foundation(US) GBMF4983.01
Program: Science
Institutional support: RVO:60077344
Keywords : transcriptome * algorithm * evolution * alignment * reconstruction * generation * protists * platform * extreme * tool
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 16.971, year: 2020
Method of publishing: Open access
https://academic.oup.com/nar/article/48/5/2694/5699674
Permanent Link: http://hdl.handle.net/11104/0316093 - 7.0537241 - BC 2021 RIV GB eng J - Journal Article
Faktorová, Drahomíra - Nisbet, R.E.R. - Robledo, J.A.F. - Casacuberta, E. - Sudek, L. - Allen, A. E. - Ares, M. - Areste, C. - Balestreri, C. - Barbrook, A.C. - Beardslee, P. - Bender, S. - Booth, D.S. - Bowler, C. - Breglia, S.A. - Brownlee, C. - Burger, G. - Cerutti, H. - Cesaroni, R. - Chiurillo, M.A. - Clemente, T. - Coles, D.B. - Collier, J.L. - Cooney, E.C. - Coyne, K. - Docampo, R. - Dupont, C.L. - Edgcomb, V. - Einarsson, E. - Elustondo, P.A. - Federici, F. - Freire-Beneitez, V. - Freyria, N.J. - Fukuda, K. - Garcia, P.A. - Girguis, P.R. - Gomaa, F. - Hampl, V. - Kachale, Ambar - Kaur, Binnypreet - Keeling, P. J. - Vanclová-Novák, A.M.G. - Pyrih, J. - Lukeš, Julius … Total 113 authors
Genetic tool development in marine protists: emerging model organisms for experimental cell biology.
Nature Methods. Roč. 17, č. 5 (2020), s. 481-494. ISSN 1548-7091. E-ISSN 1548-7105
R&D Projects: GA MŠMT(CZ) EF16_019/0000759
Grant - others:Gordon and Betty Moore Foundation(US) GMBM4982.01
Institutional support: RVO:60077344
Keywords : homologous recombination * transformation * genome
OECD category: Microbiology
Impact factor: 28.547, year: 2020
Method of publishing: Open access
https://www.nature.com/articles/s41592-020-0796-x
Permanent Link: http://hdl.handle.net/11104/0314982 - 8.0498712 - BC 2019 RIV GB eng J - Journal Article
Kaur, Binnypreet - Valach, M. - Peña-Diaz, Priscila - Moreira, S. - Keeling, P. J. - Burger, G. - Lukeš, Julius - Faktorová, Drahomíra
Transformation of Diplonema papillatum, the type species of the highly diverse and abundant marine microeukaryotes Diplonemida (Euglenozoa).
Environmental Microbiology. Roč. 20, č. 3 (2018), s. 1030-1040. ISSN 1462-2912. E-ISSN 1462-2920
R&D Projects: GA ČR GA15-21974S; GA ČR(CZ) GA16-18699S; GA MŠMT LL1601
Institutional support: RVO:60077344
Keywords : TRYPANOSOMA-BRUCEI * GENE-EXPRESSION * PROTEINS * DNA * KINETOPLASTIDA * RECOMBINATION * TRANSFECTION * EUKARYOTES
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 5.147, year: 2018
Permanent Link: http://hdl.handle.net/11104/0290994 - 9.0468794 - BC 2017 RIV US eng J - Journal Article
Valach, M. - Moreira, S. - Faktorová, Drahomíra - Lukeš, Julius - Burger, G.
Post-transcriptional mending of gene sequences: looking under the hood of mitochondrial gene expression in diplonemids.
RNA biology. Roč. 13, č. 12 (2016), s. 1204-1211. ISSN 1547-6286. E-ISSN 1555-8584
R&D Projects: GA ČR GA15-21974S
Institutional support: RVO:60077344
Keywords : Cryptic genes * gene fragmentation * trans-splicing * RNA editing * multipartite mtDNA * diplonemids
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 3.900, year: 2016
Permanent Link: http://hdl.handle.net/11104/0266619 - 10.0364837 - BC 2012 RIV DE eng J - Journal Article
Flegontov, Pavel - Gray, M.W. - Burger, G. - Lukeš, Julius
Gene fragmentation: a key to mitochondrial genome evolution in Euglenozoa?
Current Genetics. Roč. 57, č. 4 (2011), 225-232. ISSN 0172-8083. E-ISSN 1432-0983
Institutional research plan: CEZ:AV0Z60220518
Keywords : Euglena * Diplonema * Mitochondrial genome * RNA editing * Constructive neutral evolution
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 2.556, year: 2011
Permanent Link: http://hdl.handle.net/11104/0200214