Search results
- 1.0560255 - BC 2023 RIV CH eng J - Journal Article
Vargova, R. - Hanousková, P. - Salamonová, J. - Zihala, D. - Silberman, Jeffrey Donald - Eliáš, M. - Čepička, I.
Evidence for an Independent Hydrogenosome-to-Mitosome Transition in the CL3 Lineage of Fornicates.
Frontiers in Microbiology. Roč. 13, MAY (2022), č. článku 866459. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA ČR(CZ) GJ20-14903Y
Institutional support: RVO:60077344
Keywords : Caviomonadidae * caviomonads * codon reassignment * Fornicata * hydrogenosome * mitochondrial evolution * mitosome
OECD category: Behavioral sciences biology
Impact factor: 5.2, year: 2022
Method of publishing: Limited access
https://www.frontiersin.org/articles/10.3389/fmicb.2022.866459/full
Permanent Link: https://hdl.handle.net/11104/0340543 - 2.0560252 - BC 2023 RIV GB eng J - Journal Article
Pilátová, Jana - Pánek, T. - Oborník, Miroslav - Čepička, I. - Mojžes, P.
Revisiting biocrystallization: purine crystalline inclusions are widespread in eukaryotes.
The ISME Journal. Roč. 16, č. 9 (2022), s. 2290-2294. ISSN 1751-7362. E-ISSN 1751-7370
R&D Projects: GA ČR(CZ) GA19-19297S; GA ČR(CZ) GA21-03224S; GA ČR(CZ) GA21-26115S; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2018129
Institutional support: RVO:60077344
Keywords : biocrystallization * crystalline * inclusions
OECD category: Microbiology
Impact factor: 11, year: 2022
Method of publishing: Limited access
https://www.nature.com/articles/s41396-022-01264-1
Permanent Link: https://hdl.handle.net/11104/0340200 - 3.0558627 - BC 2023 RIV DE eng J - Journal Article
Céza, V. - Kotyk, M. - Kubánková, A. - Yubuki, N. - Šťáhlavský, F. - Silberman, Jeffrey Donald - Čepička, I.
Free-living Trichomonads are Unexpectedly Diverse.
Protist. Roč. 173, č. 4 (2022), č. článku 125883. ISSN 1434-4610. E-ISSN 1618-0941
R&D Projects: GA ČR(CZ) GA22-22538S
Institutional support: RVO:60077344
Keywords : evolutionary * parabasalia * affinities * flagellate * hexamastix * phylogeny * loukozoa * excavata * insights * Parabasalia * Alexandriella * Pimpavicka * new species * amphizoic
OECD category: Microbiology
Impact factor: 2.5, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S1434461022000281?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0340563 - 4.0555513 - BC 2023 RIV GB eng J - Journal Article
Záhonová, Kristýna - Treitli, S.C. - Le, T. - Škodová-Sveráková, Ingrid - Hanousková, P. - Čepička, I. - Tachezy, J. - Hampl, V.
Anaerobic derivates of mitochondria and peroxisomes in the free-living amoeba Pelomyxa schiedti revealed by single-cell genomics.
BMC BIOLOGY. Roč. 20, č. 1 (2022), č. článku 56. E-ISSN 1741-7007
R&D Projects: GA MŠMT(CZ) EF16_019/0000759; GA ČR(CZ) GA19-19297S; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) EF16_013/0001775; GA MŠMT(CZ) EF18_046/0016045
Institutional support: RVO:60077344
Keywords : protein import * rna-seq * alignment * evolution * mechanism * system * origin * dehydrogenases * organelles * eukaryote * Pelomyxa * Mitochondrion-related organelle * Hydrogenosome * Anaerobic peroxisome * Anaerobiosis * FeS cluster assembly * Single-cell genomics
OECD category: Cell biology
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-022-01247-w
Permanent Link: https://hdl.handle.net/11104/0340550 - 5.0555493 - ÚMG 2022 RIV GB eng J - Journal Article
Soukal, P. - Hrdá, Š. - Karnkowska, A. - Milanowski, R. - Szabová, J. - Hradilová, Miluše - Strnad, Hynek - Vlček, Čestmír - Čepička, I. - Hampl, V.
Heterotrophic euglenid Rhabdomonas costata resembles its phototrophic relatives in many aspects of molecular and cell biology.
Scientific Reports. Roč. 11, č. 1 (2021), č. článku 13070. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA MŠMT(CZ) LQ1604
Institutional support: RVO:68378050
Keywords : phylogenetic analysis * energy-metabolism * sequence * introns * genome * rna * alignment * proteins * gracilis * identification
OECD category: Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology
Impact factor: 4.997, year: 2021
Method of publishing: Open access
https://www.nature.com/articles/s41598-021-92174-3
Permanent Link: http://hdl.handle.net/11104/0330000 - 6.0555026 - BC 2022 RIV GB eng J - Journal Article
Stairs, C.W. - Táborský, P. - Salomaki, Eric David - Kolísko, Martin - Pánek, T. - Eme, L. - Hradilová, Miluše - Vlček, Čestmír - Jerlstrom-Hultqvist, J. - Roger, A. - Čepička, I.
Anaeramoebae are a divergent lineage of eukaryotes that shed light on the transition from anaerobic mitochondria to hydrogenosomes.
Current Biology. Roč. 31, č. 24 (2021), s. 5605-+. ISSN 0960-9822. E-ISSN 1879-0445
R&D Projects: GA MŠMT(CZ) EF20_079/0017809; GA ČR(CZ) GA18-28103S; GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344 ; RVO:68378050
Keywords : subcellular-localization * proteins * reconstruction * annotation * generation * prediction * evolution * import * mafft * tool
OECD category: Cell biology; Cell biology (UMG-J)
Impact factor: 10.900, year: 2021
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0960982221013646?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0329644 - 7.0554937 - BC 2022 RIV GB eng J - Journal Article
Salomaki, Eric David - Terpis, K. - Rueckert, S. - Kotyk, M. - Varadinová, Z. - Čepička, I. - Lane, C. E. - Kolísko, Martin
Gregarine single-cell transcriptomics reveals differential mitochondrial remodeling and adaptation in apicomplexans.
BMC BIOLOGY. Roč. 19, č. 1 (2021), č. článku 77. E-ISSN 1741-7007
R&D Projects: GA MŠMT(CZ) EF16_027/0008357; GA MŠMT(CZ) EF20_079/0017809; GA ČR(CZ) GA19-19297S; GA ČR(CZ) GA18-28103S; GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344
Keywords : horizontal gene-transfer * cytoplasmic malate-dehydrogenases * acetyl-coa synthetase * citric-acid cycle * genome-sequence * pyruvate-nadp(+) oxidoreductase * cryptosporidium-parvum * energy-metabolism * rodent malaria * atp synthase * Mitochondria * Apicomplexa * Anaerobic metabolism * Phylogenomics * Evolution * Eugregarines * Mitosome * Parasitism
OECD category: Biochemistry and molecular biology
Impact factor: 7.364, year: 2021
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-021-01007-2
Permanent Link: http://hdl.handle.net/11104/0329554 - 8.0553925 - BC 2022 RIV GB eng J - Journal Article
Horváthová, L. - Žárský, V. - Pánek, T. - Derelle, R. - Pyrih, Jan - Motyčková, A. - Klapsťová, V. - Vinopalova, M. - Marková, L. - Voleman, L. - Klimeš, V. - Petrů, M. - Vaitová, Z. - Čepička, I. - Hryzakova, K. - Harant, K. - Gray, M.W. - Chami, M. - Guilvout, I. - Francetic, O. - Lang, B. - Vlček, Čestmír - Tsaousis, A. - Eliaš, M. - Doležal, P.
Analysis of diverse eukaryotes suggests the existence of an ancestral mitochondrial apparatus derived from the bacterial type II secretion system.
Nature Communications. Roč. 12, č. 1 (2021), č. článku 2947. E-ISSN 2041-1723
R&D Projects: GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344 ; RVO:68378050
Keywords : multiple sequence alignment * protein secretion * swiss-model * molecular architecture * structural insights * crystal-structure * atpase gspe * membrane * prediction * complex
OECD category: Microbiology; Microbiology (UMG-J)
Impact factor: 17.694, year: 2021
Method of publishing: Open access
https://www.nature.com/articles/s41467-021-23046-7
Permanent Link: http://hdl.handle.net/11104/0328602 - 9.0543543 - BÚ 2022 RIV US eng J - Journal Article
Kolátková, V. - Čepička, I. - Hoffman, R. - Vohník, Martin
Marinomyxa gen. nov. accommodates gall-forming parasites of the tropical to subtropical seagrass genus Halophila and constitutes a novel deep-branching lineage within Phytomyxea (Rhizaria: Endomyxa).
Microbial Ecology. Roč. 81, č. 3 (2021), s. 673-686. ISSN 0095-3628. E-ISSN 1432-184X
Institutional support: RVO:67985939
Keywords : seagrass symbionts * phytomyxids * TAGIRI-5 * phylogeny
OECD category: Marine biology, freshwater biology, limnology
Impact factor: 4.192, year: 2021
Method of publishing: Limited access
https://doi.org/10.1007/s00248-020-01615-5
Permanent Link: http://hdl.handle.net/11104/0320746File Download Size Commentary Version Access Marinomyxa Gen. Nov. Accommodates.pdf 0 10.2 MB Other require - 10.0540095 - BC 2021 RIV GB eng J - Journal Article
Rotterova, J. - Salomaki, Eric David - Pánek, T. - Bourland, W. - Zihala, D. - Táborský, Petr - Edgcomb, V.P. - Beinart, R.A. - Kolísko, Martin - Čepička, I.
Genomics of New Ciliate Lineages Provides Insight into the Evolution of Obligate Anaerobiosis.
Current Biology. Roč. 30, č. 11 (2020), s. 2037-2050.e6. ISSN 0960-9822. E-ISSN 1879-0445
R&D Projects: GA ČR(CZ) GA19-19297S; GA MŠMT(CZ) EF16_027/0008357; GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344
Keywords : methanogenic bacteria * fam. nov. * identification * hydrogenosomes * mitochondria * armophorea * ciliophora * organelles * biochemistry * hydrogenase
OECD category: Microbiology
Impact factor: 10.834, year: 2020
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/abs/pii/S0960982220304346?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0317768