Search results
- 1.0560041 - BFÚ 2023 RIV GB eng J - Journal Article
Lexa, Matej - Čechová, M. - Nguyen, S. H. - Jedlička, Pavel - Tokan, Viktor - Kubát, Zdeněk - Hobza, Roman - Kejnovský, Eduard
HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization.
Bioinformatics. Roč. 38, č. 16 (2022), s. 4030-4032. ISSN 1367-4803. E-ISSN 1460-2059
R&D Projects: GA ČR(CZ) GA21-00580S
Institutional support: RVO:68081707
Keywords : TRANSPOSABLE ELEMENTS * SEQUENCE
OECD category: Biochemistry and molecular biology
Impact factor: 5.8, year: 2022
Method of publishing: Open access
https://academic.oup.com/bioinformatics/article/38/16/4030/6628581?login=true
Permanent Link: https://hdl.handle.net/11104/0340534 - 2.0557230 - BFÚ 2023 RIV GB eng J - Journal Article
Žlůvová, Jitka - Kubát, Zdeněk - Hobza, Roman - Janoušek, Bohuslav
Adaptive changes of the autosomal part of the genome in a dioecious clade of Silene.
Philosophical Transactions of the Royal Society B-Biological Sciences. Roč. 377, č. 1850 (2022), č. článku 20210228. ISSN 0962-8436. E-ISSN 1471-2970
Institutional support: RVO:68081707
Keywords : bayesian phylogenetic inference * male-sterility * evolution * selection * mrbayes * polymorphism * performance
OECD category: Biochemistry and molecular biology
Impact factor: 6.3, year: 2022
Method of publishing: Limited access
https://royalsocietypublishing.org/doi/10.1098/rstb.2021.0228
Permanent Link: https://hdl.handle.net/11104/0340447 - 3.0544545 - BFÚ 2022 RIV GB eng J - Journal Article
Jesionek, Wojciech - Bodláková, Markéta - Kubát, Zdeněk - Čegan, Radim - Vyskot, Boris - Vrána, Jan - Šafář, Jan - Puterova, Janka - Hobza, Roman
Fundamentally different repetitive element composition of sex chromosomes in Rumex acetosa.
Annals of Botany. Roč. 127, č. 1 (2021), s. 33-47. ISSN 0305-7364. E-ISSN 1095-8290
R&D Projects: GA ČR(CZ) GA18-06147S; GA ČR GA16-08698S; GA ČR(CZ) GA19-15609S
Institutional support: RVO:68081707 ; RVO:61389030
Keywords : y-chromosome * dioecious plant * transposable element * melandrium-album * dna methylation * satellite-dna
OECD category: Plant sciences, botany; Plant sciences, botany (UEB-Q)
Impact factor: 5.040, year: 2021
Method of publishing: Limited access
https://academic.oup.com/aob/article-abstract/127/1/33/5903355?redirectedFrom=fulltext
Permanent Link: http://hdl.handle.net/11104/0321390 - 4.0506513 - BFÚ 2020 RIV NL eng J - Journal Article
Hobza, Roman - Kubát, Zdeněk - Čegan, Radim - Jesionek, Wojciech - Vyskot, Boris - Kejnovský, Eduard
Impact of repetitive DNA on sex chromosome evolution in plants.
Chromosome Research. Roč. 23, č. 3 (2015), s. 561-570. ISSN 0967-3849. E-ISSN 1573-6849
R&D Projects: GA ČR GBP501/12/G090; GA ČR GAP501/12/2220; GA ČR GJ15-21523Y; GA ČR GA15-02891S
Institutional support: RVO:68081707 ; RVO:61389030
Keywords : primitive y-chromosome * transposable elements * dioecious plant * silene-latifolia * retrotransposon
OECD category: Biochemistry and molecular biology; Biochemistry and molecular biology (UEB-Q)
Impact factor: 2.590, year: 2015
Method of publishing: Limited access
https://link.springer.com/article/10.1007%2Fs10577-015-9496-2
Permanent Link: http://hdl.handle.net/11104/0297745 - 5.0503144 - BFÚ 2019 RIV GB eng J - Journal Article
Hobza, Roman - Hudzieczek, Vojtěch - Kubát, Zdeněk - Čegan, Radim - Vyskot, Boris - Kejnovský, Eduard - Janoušek, Bohuslav
Sex and the flower developmental aspects of sex chromosome evolution.
Annals of Botany. Roč. 122, č. 7 (2018), s. 1085-1101. ISSN 0305-7364. E-ISSN 1095-8290
R&D Projects: GA ČR(CZ) GA18-06147S; GA ČR GA13-06264S; GA ČR GA16-08698S; GA ČR GJ15-21523Y; GA ČR(CZ) GA18-00258S; GA ČR(CZ) GA17-00567S
Institutional support: RVO:68081707
Keywords : campion silene-latifolia * cotula l compositae * y-chromosome
OECD category: Plant sciences, botany
Impact factor: 3.454, year: 2018
Permanent Link: http://hdl.handle.net/11104/0294964 - 6.0488382 - BFÚ 2018 RIV US eng J - Journal Article
Puterova, Janka - Kubát, Zdeněk - Kejnovský, Eduard - Jesionek, Wojciech - Čížková, Jana - Vyskot, Boris - Hobza, Roman
The slowdown of Y chromosome expansion in dioecious Silene latifolia due to DNA loss and male-specific silencing of retrotransposons.
BMC Genomics. Roč. 19, FEB2018 (2018). ISSN 1471-2164. E-ISSN 1471-2164
R&D Projects: GA ČR GJ15-21523Y
Institutional support: RVO:68081707 ; RVO:61389030
Keywords : sex-linked genes * plant silene * transposable elements
OECD category: Plant sciences, botany; Plant sciences, botany (UEB-Q)
Impact factor: 3.501, year: 2018
Permanent Link: http://hdl.handle.net/11104/0282969File Download Size Commentary Version Access 2018_Puterova_BMC GENOMICS_153.pdf 6 1.3 MB Other open-access - 7.0486107 - BFÚ 2018 RIV CH eng J - Journal Article
Hobza, Roman - Čegan, Radim - Jesionek, Wojciech - Kejnovský, Eduard - Vyskot, Boris - Kubát, Zdeněk
Impact of Repetitive Elements on the Y Chromosome Formation in Plants.
Genes. Roč. 8, č. 11 (2017), č. článku 302. E-ISSN 2073-4425
R&D Projects: GA ČR GA16-08698S; GA ČR GJ15-21523Y
Institutional support: RVO:68081707
Keywords : papaya sex-chromosomes * male-specific region * transposable elements * silene-latifolia
OECD category: Developmental biology
Impact factor: 3.191, year: 2017
Permanent Link: http://hdl.handle.net/11104/0280984 - 8.0485763 - BFÚ 2018 RIV GB eng J - Journal Article
Puterova, Janka - Razumova, O. - Martínek, T. - Alexandrov, O. - Divashuk, M. - Kubát, Zdeněk - Hobza, Roman - Karlov, G. - Kejnovský, Eduard
Satellite DNA and Transposable Elements in Seabuckthorn (Hippophae rhamnoides), a Dioecious Plant with Small Y and Large X Chromosomes.
Genome Biology and Evolution. Roč. 9, č. 1 (2017), s. 197-212. ISSN 1759-6653. E-ISSN 1759-6653
R&D Projects: GA ČR GBP501/12/G090
Grant - others:GA MŠk(CZ) LM2010005
Institutional support: RVO:68081707
Keywords : sex-chromosomes * repetitive sequences * silene-latifolia
OECD category: Developmental biology
Impact factor: 3.940, year: 2017
Permanent Link: http://hdl.handle.net/11104/0280706 - 9.0473616 - BFÚ 2018 RIV GB eng J - Journal Article
Manzano, S. - Megias, Z. - Martinez, C. - Garcia, A. - Aguado, E. - Chileh, T. - Lopez-Alonso, D. - Garcia-Maroto, F. - Kejnovský, Eduard - Široký, Jiří - Kubát, Zdeněk - Králová, Tereza - Vyskot, Boris - Jamilena, M.
Overexpression of a flower-specific aerolysin-like protein from the dioecious plant Rumex acetosa alters flower development and induces male sterility in transgenic tobacco.
Plant Journal. Roč. 89, č. 1 (2017), s. 58-72. ISSN 0960-7412. E-ISSN 1365-313X
Institutional support: RVO:68081707
Keywords : sex determination * Rumex acetosa * aerolysin-like protein
OECD category: Plant sciences, botany
Impact factor: 5.775, year: 2017
Permanent Link: http://hdl.handle.net/11104/0270753 - 10.0446325 - BFÚ 2016 RIV GB eng J - Journal Article
Michalovová, Monika - Kubát, Zdeněk - Hobza, Roman - Vyskot, Boris - Kejnovský, Eduard
Fully automated pipeline for detection of sex linked genes using RNA-Seq data.
BMC Bioinformatics. Roč. 16, č. 78 (2015). ISSN 1471-2105. E-ISSN 1471-2105
R&D Projects: GA ČR(CZ) GBP501/12/G090; GA MŠMT(CZ) LM2010005
Institutional support: RVO:68081707
Keywords : SILENE-LATIFOLIA * RUMEX-ACETOSA * Y-CHROMOSOME
Subject RIV: BO - Biophysics; EF - Botanics (UEB-Q)
Impact factor: 2.435, year: 2015
Permanent Link: http://hdl.handle.net/11104/0248351File Download Size Commentary Version Access 2015_Michalovova_BMC BIOINFORMATICS_78.pdf 3 1.3 MB Other open-access