Search results
- 1.0559752 - ÚMG 2023 RIV DE eng J - Journal Article
Dinesh, R. K. - Barnhill, B. - Ilanges, A. - Wu, L. - Michelson, D.A. - Šenigl, Filip - Alinikula, J. - Shabanowitz, J. - Hunt, D. F. - Schatz, D. G.
Transcription factor binding at Ig enhancers is linked to somatic hypermutation targeting.
European Journal of Immunology. Roč. 50, č. 3 (2020), s. 380-395. ISSN 0014-2980. E-ISSN 1521-4141
R&D Projects: GA ČR GA15-24776S
Institutional support: RVO:68378050
Keywords : aid * e2a * mef2b * Ramos B cell line * Somatic hypermutation
OECD category: Immunology
Impact factor: 5.532, year: 2020
Method of publishing: Open access
https://onlinelibrary.wiley.com/doi/10.1002/eji.201948357
Permanent Link: https://hdl.handle.net/11104/0332957 - 2.0555983 - ÚMG 2023 RIV US eng J - Journal Article
Tarsalainen, A. - Maman, Y. - Meng, F. - Kylaniemi, M. - Soikkeli, A. - Budzynska, P. - McDonald, J. - Šenigl, Filip - Alt, F. - Schatz, D. G. - Alinikula, J.
Ig Enhancers Increase RNA Polymerase II Stalling at Somatic Hypermutation Target Sequences.
Journal of Immunology. Roč. 208, č. 1 (2022), s. 143-154. ISSN 0022-1767. E-ISSN 1550-6606
R&D Projects: GA ČR GA15-24776S
Institutional support: RVO:68378050
Keywords : induced cytidine deaminase * class switch recombination * single-stranded-dna * b-cell genome * super-enhancers * deficiency causes * terminal domain * histone h3.3 * aid * transcription
OECD category: Immunology
Impact factor: 4.4, year: 2022
Method of publishing: Open access
https://journals.aai.org/jimmunol/article/208/1/143/234155/Ig-Enhancers-Increase-RNA-Polymerase-II-Stalling
Permanent Link: http://hdl.handle.net/11104/0330835 - 3.0554917 - ÚMG 2022 RIV CH eng J - Journal Article
Koslová, Anna - Trefil, P. - Mucksová, J. - Krchlíková, Veronika - Plachý, Jiří - Krijt, J. - Reinišová, Markéta - Kučerová, Dana - Geryk, Josef - Kalina, J. - Šenigl, Filip - Elleder, Daniel - Kožich, V. - Hejnar, Jiří
Knock-Out of Retrovirus Receptor Gene Tva in the Chicken Confers Resistance to Avian Leukosis Virus Subgroups A and K and Affects Cobalamin (Vitamin B-12)-Dependent Level of Methylmalonic Acid.
Viruses. Roč. 13, č. 12 (2021), č. článku 2504. E-ISSN 1999-4915
R&D Projects: GA MZe(CZ) QK1810344
Institutional support: RVO:68378050
Keywords : avian leukosis virus subgroups A * k * tva * gene editing in chicken * vitamin B-12 * cobalamin
OECD category: Virology
Impact factor: 5.818, year: 2021
Method of publishing: Open access
https://www.mdpi.com/1999-4915/13/12/2504
Permanent Link: http://hdl.handle.net/11104/0329536 - 4.0524787 - ÚŽFG 2021 RIV GB eng J - Journal Article
Rohiwal, Sonali Suresh - Dvořáková, N. - Klíma, Jiří - Vaškovičová, Michaela - Šenigl, Filip - Šlouf, Miroslav - Pavlová, Eva - Štěpánek, Petr - Babuka, David - Beneš, Hynek - Ellederová, Zdeňka - Stieger, K.
Polyethylenimine based magnetic nanoparticles mediated non-viral CRISPR/Cas9 system for genome editing.
Scientific Reports. Roč. 10, č. 1 (2020), č. článku 4619. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA MŠMT(CZ) LO1609; GA TA ČR(CZ) TN01000008; GA MŠMT(CZ) LO1507
Institutional support: RVO:67985904 ; RVO:68378050 ; RVO:61389013
Keywords : nanoparticles * CRISP/Cas9 * genome editing
OECD category: Genetics and heredity (medical genetics to be 3); Polymer science (UMCH-V)
Impact factor: 4.380, year: 2020
Method of publishing: Open access
https://www.nature.com/articles/s41598-020-61465-6
Permanent Link: http://hdl.handle.net/11104/0309077 - 5.0520645 - ÚMG 2020 RIV US eng J - Journal Article
Šenigl, Filip - Maman, Y. - Dinesh, R. K. - Alinikula, J. - Seth, R. B. - Pecnová, Lubomíra - Omer, A. D. - Rao, S. S. P. - Weisz, D. - Buerstedde, J.-M. - Aiden, E. L. - Casellas, R. - Hejnar, Jiří - Schatz, D. G.
Topologically Associated Domains Delineate Susceptibility to Somatic Hypermutation.
Cell Reports. Roč. 29, č. 12 (2019), s. 3902-3915. ISSN 2211-1247. E-ISSN 2211-1247
R&D Projects: GA ČR GA15-24776S
Institutional support: RVO:68378050
Keywords : center b-cells * super-enhancers * targets aid * molecular-mechanisms * human genome * dna * gene * translocations * transcription * integration
OECD category: Immunology
Impact factor: 8.109, year: 2019
Method of publishing: Open access
https://www.cell.com/cell-reports/fulltext/S2211-1247(19)31521-9?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS2211124719315219%3Fshowall%3Dtrue
Permanent Link: http://hdl.handle.net/11104/0305794File Download Size Commentary Version Access Cell_Reports_F_Senigl_2019.pdf 1 4.6 MB Publisher’s postprint require - 6.0510424 - ÚMG 2020 RIV US eng J - Journal Article
Přikryl, David - Plachý, Jiří - Kučerová, Dana - Koslová, Anna - Reinišová, Markéta - Šenigl, Filip - Hejnar, Jiří
The Novel Avian Leukosis Virus Subgroup K Shares Its Cellular Receptor with Subgroup A.
Journal of Virology. Roč. 93, č. 17 (2019), č. článku e00580-19. ISSN 0022-538X. E-ISSN 1098-5514
R&D Projects: GA MŠMT LO1419; GA ČR(CZ) GA17-23675S
Institutional support: RVO:68378050
Keywords : avian leukosis virus K * Tva * host range * resistance/susceptibility to retrovirus * retrovirus receptor * superinfection interference
OECD category: Virology
Impact factor: 4.501, year: 2019
Method of publishing: Open access
https://jvi.asm.org/content/93/17/e00580-19
Permanent Link: http://hdl.handle.net/11104/0305795File Download Size Commentary Version Access Journal of Virology-2019-D-Přikryl.pdf 3 4.9 MB Author´s preprint require - 7.0494833 - ÚMG 2019 RIV CH eng J - Journal Article
Miklík, Dalibor - Šenigl, Filip - Hejnar, Jiří
Proviruses with Long-Term Stable Expression Accumulate in Transcriptionally Active Chromatin Close to the Gene Regulatory Elements: Comparison of ASLV-, HIV- and MLV-Derived Vectors.
Viruses. Roč. 10, č. 3 (2018), č. článku 116. E-ISSN 1999-4915
R&D Projects: GA ČR(CZ) GA14-34873S; GA ČR GA15-24776S; GA MŠMT LO1419
Institutional support: RVO:68378050
Keywords : retrovirus integration * provirus silencing * gene regulatory elements * genome-wide provirus distribution
OECD category: Virology
Impact factor: 3.811, year: 2018
Permanent Link: http://hdl.handle.net/11104/0287894File Download Size Commentary Version Access Viruses-D_Miklik-2018.pdf 2 959.1 KB Publisher’s postprint require - 8.0487081 - ÚMG 2018 RIV GB eng J - Journal Article
Šenigl, Filip - Miklík, Dalibor - Auxt, Miroslav - Hejnar, Jiří
Accumulation of long-term transcriptionally active integrated retroviral vectors in active promoters and enhancers.
Nucleic Acids Research. Roč. 45, č. 22 (2017), s. 12752-12765. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GA14-34873S; GA MŠMT LO1419
Institutional support: RVO:68378050
Keywords : human-immunodeficiency-virus * dna methylation * site selection * human genome * avian-sarcoma * morphological reversion * hiv-1 integration * mlv integration * gene-expression * leukosis virus
OECD category: Virology
Impact factor: 11.561, year: 2017
Permanent Link: http://hdl.handle.net/11104/0281763File Download Size Commentary Version Access Nucleic_Acids_Research_F_Senigl_2017.pdf 2 1.2 MB Publisher’s postprint require - 9.0473165 - ÚMG 2017 RIV US eng J - Journal Article
Plachý, Jiří - Reinišová, Markéta - Kučerová, Dana - Šenigl, Filip - Stepanets, Volodymyr - Hron, Tomáš - Trejbalová, Kateřina - Elleder, Daniel - Hejnar, Jiří
Identification of New World Quails Susceptible to Infection with Avian Leukosis Virus Subgroup J.
Journal of Virology. Roč. 91, č. 3 (2017), č. článku e02002. ISSN 0022-538X. E-ISSN 1098-5514
R&D Projects: GA ČR GA13-30983S; GA MŠMT LO1419
Institutional support: RVO:68378050
Keywords : ALV-J * antiretroviral resistance * Na+/H+ exchanger * New World quail * retroviral receptor
OECD category: Virology
Impact factor: 4.368, year: 2017
Permanent Link: http://hdl.handle.net/11104/0270328File Download Size Commentary Version Access Journal_of_Virology_J_Plachy_2017.pdf 9 1.9 MB Publisher’s postprint require - 10.0458088 - ÚMG 2016 RIV US eng J - Journal Article
Reinišová, Markéta - Plachý, Jiří - Kučerová, Dana - Šenigl, Filip - Vinkler, M. - Hejnar, Jiří
Genetic Diversity of NHE1, Receptor for Subgroup J Avian Leukosis Virus, in Domestic Chicken and Wild Anseriform Species.
PLoS ONE. Roč. 11, č. 3 (2016), e0150589-e0150589. ISSN 1932-6203. E-ISSN 1932-6203
R&D Projects: GA MŠMT LO1419; GA ČR GA13-30983S
Institutional support: RVO:68378050
Keywords : avian leukosis virus * NHE1 * Genetic Diversity
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 2.806, year: 2016
Permanent Link: http://hdl.handle.net/11104/0258409File Download Size Commentary Version Access Plos_M_Reinisova_2016.pdf 5 1.2 MB Publisher’s postprint require