Search results
- 1.0586162 - MBÚ 2025 RIV GB eng J - Journal Article
Rocha, U. - Kasmanas, J. C. - Kallies, R. - Saraiva, J. P. - Toscan, R. B. - Stefanic, P. - Bicalho, M. F. - Correa, F. B. - Bastuerk, M. N. - Fousekis, E. - Barbosa, L. M. V. - Plewka, J. - Probst, A. J. - Baldrian, Petr - Stadler, P. f.
MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy.
Molecular Ecology Resources. Roč. 24, č. 2 (2024), č. článku 13904. ISSN 1755-098X. E-ISSN 1755-0998
Institutional support: RVO:61388971
Keywords : microbial genomes * metabolism * assembler * coverage * phage * genome reconstruction * metagenome-assembled genomes * metagenomics * multi-domain * uncultivated viral genomes
OECD category: Microbiology
Impact factor: 7.7, year: 2022
Method of publishing: Limited access
https://onlinelibrary.wiley.com/doi/10.1111/1755-0998.13904
Permanent Link: https://hdl.handle.net/11104/0353749 - 2.0585872 - MBÚ 2025 RIV GB eng J - Journal Article
Odriozola Larranga, Inaki - Martinović, Tijana - Mašínová, Tereza - Bahnmann, Barbara Doreen - Machač, Antonín - Sedlák, P. - Tomšovský, M. - Baldrian, Petr
The spatial patterns of community composition, their environmental drivers and their spatial scale dependence vary markedly between fungal ecological guilds.
Global Ecology and Biogeography. Roč. 33, č. 1 (2024), s. 173-188. ISSN 1466-822X. E-ISSN 1466-8238
R&D Projects: GA ČR(CZ) GA21-17749S
Institutional support: RVO:61388971
Keywords : dispersal * distance decay * environmental filtering * fungal biogeography * metabarcoding * soil biodiversity * spatial community turnover
OECD category: Microbiology
Impact factor: 6.4, year: 2022
Method of publishing: Limited access
https://onlinelibrary.wiley.com/doi/epdf/10.1111/geb.13772
Permanent Link: https://hdl.handle.net/11104/0353521 - 3.0585804 - MBÚ 2025 RIV US eng J - Journal Article
Bosch, Jason - Dobbler, Priscila Thiago - Větrovský, Tomáš - Tláskal, Vojtěch - Baldrian, Petr - Brabcová, Vendula
Decomposition of Fomes fomentatius fruiting bodies –transition of healthy living fungus into a deca y ed bacteria-ric h ha bita t is primaril y dri v en by Arthropoda.
FEMS Microbiology Ecology. Roč. 100, č. 5 (2024), č. článku fiae044. ISSN 0168-6496. E-ISSN 1574-6941
R&D Projects: GA ČR(CZ) GC21-09334J; GA MŠMT(CZ) EH22_008/0004597
Institutional support: RVO:61388971
Keywords : deadwood fungi * Fomes fomentarius * fruiting body * microbial communities * mycelium decomposition * temperate forest
OECD category: Microbiology
Impact factor: 4.2, year: 2022
Method of publishing: Open access
https://academic.oup.com/femsec/article/100/5/fiae044/7637780
Permanent Link: https://hdl.handle.net/11104/0353479File Download Size Commentary Version Access Bosch 2024 FEMS Microbiology Ecology.pdf 0 863.4 KB Author’s postprint require - 4.0585458 - MBÚ 2025 RIV DE eng J - Journal Article
Hyde, K. D. - Baldrian, Petr - Chen, Y. - Chethana, K. W. T. - de Hoog, S. - Doilom, M. - Gomes de Farias, A. R. - Goncalves, M. F. M. - Gonkhom, D. - Gui, H. - Hilario, S. - Hu, Y. - Jayawardena, R. S. - Khyaju, S. - Kirk, P. M. - Kohout, Petr - Luangharn, T. - Maharachchikumbura, S. S. N. - Manawasinghe, Ishara S. - Mortimer, P. E. - Niego, A. G. T. - Phonemany, M. - Sandargo, B. - Senanayake, I. C. - Stadler, M. - Surup, F. - Thongklang, N. - Wanasinghe, D. N. - Bahkali, A. H. - Walker, A.
Current trends, limitations and future research in the fungi?
Fungal Diversity. Roč. 125, č. 1 (2024), s. 1-71. ISSN 1560-2745. E-ISSN 1878-9129
R&D Projects: GA MŠMT(CZ) LUC23152
Institutional support: RVO:61388971
Keywords : arbuscular mycorrhizal fungi * silver nanoparticles * endophytic fungi * plant-pathogens * agaricus-bisporus * green synthesis * genome-scale * karnal-bunt * phylogenetic contributions * submerged fermentation * amf * Biocircular economy * Biocontrol * Data repositories * Drug discovery * Ecology * Emerging diseases * Functional genomics * Fungal classification * hts * Machine learning * Mycoremediation * Nanotechnology * Novel compounds * Phylogenomics * Plant pathology * Species numbers
OECD category: Microbiology
Impact factor: 20.3, year: 2022
Method of publishing: Open access
https://link.springer.com/article/10.1007/s13225-023-00532-5
Permanent Link: https://hdl.handle.net/11104/0353372 - 5.0580681 - MBÚ 2024 RIV NL eng J - Journal Article
Theissinger, K. - Fernandes, C. - Formenti, G. - Bista, I. - Berg, P. R. - Bleidorn, C. - Bombarely, A. - Crottini, A. - Gallo, G. R. - Godoy, J. A. - Jentoft, S. - Malukiewicz, J. - Mouton, A. - Oomen, R. A. - Paez, S. - Palsboll, P. J. - Pampoulie, C. - Ruiz-Lopez, M. J. - Secomandi, S. - Svardal, H. - Theofanopoulou, C. - de Vries, J. - Waldvogel, A. - Zhang, G. - Jarvis, E. D. - Balint, M. - Ciofi, C. - Waterhouse, R. M. - Mazzoni, C. J. - Höglund, J. - Baldrian, Petr
How genomics can help biodiversity conservation.
Trends in Genetics. Roč. 39, č. 7 (2023), s. 545-559. ISSN 0168-9525. E-ISSN 1362-4555
Institutional support: RVO:61388971
Keywords : inbreeding depression * genetic restoration * de-extinction * sequence * ecology * populations * adaptation * evolution * insight * erosion
OECD category: Microbiology
Impact factor: 11.4, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0168952523000203?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0349442 - 6.0580318 - MBÚ 2024 RIV GB eng J - Journal Article
Kriegel, P. - Vogel, S. - Angeleri, R. - Baldrian, Petr - Borken, W. - Bouget, C. - Brin, A. - Bussler, H. - Cocciufa, C. - Feldmann, B. - Gossner, M. M. - Haeler, E. - Hagge, J. - Hardersen, S. - Hartmann, H. - Hjaelten, J. - Kotowska, M. M. - Lachat, T. - Larrieu, L. - Leverkus, A. B. - Macagno, A. L. M. - Mitesser, O. - Mueller, J. - Obermaier, E. - Parisi, F. - Pelz, S. - Schuldt, B. - Seibold, S. - Stengel, E. - Sverdrup-Thygeson, A. - Weisser, W. - Thorn, Simon
Ambient and substrate energy influence decomposer diversity differentially across trophic levels.
Ecology Letters. Roč. 26, č. 7 (2023), s. 1157-1173. ISSN 1461-023X. E-ISSN 1461-0248
R&D Projects: GA ČR(CZ) GA22-27166S
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : saproxylic beetle assemblages * dead-wood * biodiversity conservation * global patterns * forest * scale * decay * climate * fungi * coleoptera * biodiversity * coleoptera * deadwood * Europe * saproxylic * species-energy hypothesis * trophic guild
OECD category: Microbiology; Ecology (BC-A)
Impact factor: 8.8, year: 2022
Method of publishing: Open access
https://onlinelibrary.wiley.com/doi/10.1111/ele.14227
Permanent Link: https://hdl.handle.net/11104/0349086 - 7.0579546 - MBÚ 2024 RIV GB eng J - Journal Article
Piche-Choquette, Sarah - Tláskal, Vojtěch - Vrška, T. - Jiráska, Lucie - Větrovský, Tomáš - Baldrian, Petr
Continuous microhabitats as crossroads of fungal communities in a primeval temperate forest.
Soil Biology and Biochemistry. Roč. 187, December 2023 (2023), č. článku 109187. ISSN 0038-0717
R&D Projects: GA MŠMT(CZ) LTC20073
Institutional support: RVO:61388971
Keywords : ectomycorrhizal fungi * carbon * soils * decomposition * diversity * dynamics * heterogeneity * worldwide * responses * deadwood * Microhabitats * Temperate forests * Fungal communities * Spatial heterogeneity * Diversity * Patchiness * Biogeography
OECD category: Microbiology
Impact factor: 9.7, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0038071723002493?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0348432 - 8.0579123 - MBÚ 2024 RIV GB eng J - Journal Article
Větrovský, Tomáš - Kolaříková, Zuzana - Lepinay, Clémentine - Awokunle Holla, Sandra - Davison, J. - Fleyberková, Anna - Gromyko, Anastasia - Jelínková, Barbora - Kolařík, Miroslav - Krüger, Manuela - Lejsková, Renata - Michalčíková, Lenka - Michalová, Tereza - Moora, M. - Moravcová, Andrea - Moulíková, Štěpánka - Odriozola Larranga, Inaki - Öpik, M. - Pappová, Monika - Piche-Choquette, Sarah - Skřivánek, Jakub - Vlk, Lukáš - Zobel, M. - Baldrian, Petr - Kohout, Petr
GlobalAMFungi: a global database of arbuscular mycorrhizal fungal occurrences from high-throughput sequencing metabarcoding studies.
New Phytologist. Roč. 240, č. 5 (2023), s. 2151-2163. ISSN 0028-646X. E-ISSN 1469-8137
R&D Projects: GA ČR(CZ) GA21-17749S; GA MŠMT(CZ) LM2023055
Institutional support: RVO:61388971 ; RVO:67985939
Keywords : communities * diversity * patterns * arbuscular mycorrhizal fungi * fungal biogeography * fungal diversity * glomeromycota * glomeromycotina * high-throughput sequencing
OECD category: Microbiology; Ecology (BU-J)
Impact factor: 9.4, year: 2022
Method of publishing: Open access
https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.19283
Permanent Link: https://hdl.handle.net/11104/0347986 - 9.0577005 - MBÚ 2024 RIV GB eng J - Journal Article
Le, A. V. - Větrovský, Tomáš - Baručić, D. - Saraiva, J. P. - Dobbler, Priscila Thiago - Kohout, Petr - Pospíšek, M. - da Rocha, U. N. - Kléma, J. - Baldrian, Petr
Improved recovery and annotation of genes in metagenomes through the prediction of fungal introns.
Molecular Ecology Resources. Roč. 23, č. 8 (2023), s. 1800-1811. ISSN 1755-098X. E-ISSN 1755-0998
R&D Projects: GA ČR(CZ) GA21-17749S
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:61388971
Keywords : artificial intelligence * eukaryote * fungi * gene prediction * intron * metagenomics
OECD category: Microbiology
Impact factor: 7.7, year: 2022
Method of publishing: Limited access
https://onlinelibrary.wiley.com/doi/10.1111/1755-0998.13852
Permanent Link: https://hdl.handle.net/11104/0347997 - 10.0576687 - MBÚ 2024 RIV US eng J - Journal Article
Chakraborty, A. - Šobotník, J. - Votýpková, K. - Hradecký, J. - Stiblik, P. - Synek, J. - Bourguignon, T. - Baldrian, Petr - Engel, M. S. - Novotný, Vojtěch - Odriozola Larranga, Inaki - Větrovský, Tomáš
Impact of Wood Age on Termite Microbial Assemblages.
Applied and Environmental Microbiology. Roč. 89, č. 5 (2023), č. článku e0036123. ISSN 0099-2240. E-ISSN 1098-5336
R&D Projects: GA ČR(CZ) GA16-05318S; GA ČR(CZ) GX19-28126X
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : wood-feeding termites * Reticulitermes flavipes * Microcerotermes biroi * plant defenses * terpenoids * core-microbiome * ectosymbionts * endosymbionts * bacteria * fungi
OECD category: Microbiology; Ecology (BC-A)
Impact factor: 4.4, year: 2022
Method of publishing: Open access
https://journals.asm.org/doi/10.1128/aem.00361-23
Permanent Link: https://hdl.handle.net/11104/0346131