Search results
- 1.0581575 - ÚOCHB 2025 RIV GB eng J - Journal Article
Berešová, Marie - Bufka, Jiří - Šafařík, Martin - Bouř, Petr - Šebestík, Jaroslav
Conformations and hydration of halopropionic acids studied by molecular dynamics and Raman optical activity.
Spectrochimica Acta Part A-Molecular and Biomolecular Spectroscopy. Roč. 309, March (2024), č. článku 123852. ISSN 1386-1425. E-ISSN 1873-3557
R&D Projects: GA ČR(CZ) GA22-04669S
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:61388963
Keywords : chiral halocompounds * Raman optical activity (ROA) * density functional theory (DFT) * solvation effects
OECD category: Physical chemistry
Impact factor: 4.4, year: 2022
Method of publishing: Limited access
https://doi.org/10.1016/j.saa.2024.123852
Permanent Link: https://hdl.handle.net/11104/0349676 - 2.0558956 - ÚOCHB 2023 RIV AT eng J - Journal Article
Sokolová, M. - Šestáková, Hana - Truksa, M. - Šafařík, Martin - Hadravová, Romana - Bouř, Petr - Šebestík, Jaroslav
Photochemical synthesis of pink silver and its use for monitoring peptide nitration via surface enhanced Raman spectroscopy (SERS).
Amino Acids. Roč. 54, č. 9 (2022), s. 1261-1274. ISSN 0939-4451. E-ISSN 1438-2199
R&D Projects: GA MŠMT(CZ) EF16_019/0000729; GA ČR(CZ) GA22-04669S
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:61388963
Keywords : nitration * oxidative stress * surface enhanced Raman spectroscopy (SERS) * photochemical synthesis * silver colloids * posttranslational protein modification (PTM)
OECD category: Biophysics
Impact factor: 3.5, year: 2022
Method of publishing: Limited access
https://doi.org/10.1007/s00726-022-03178-w
Permanent Link: https://hdl.handle.net/11104/0332434 - 3.0549600 - ÚOCHB 2023 RIV NL eng J - Journal Article
Hamissa, Mohamed Farouk - Niederhafner, Petr - Šestáková, Hana - Šafařík, Martin - Hadravová, Romana - Šebestík, Jaroslav
Neutral and charged forms of inubosin B in aqueous solutions at different pH and on the surface of Ag nanoparticles.
Journal of Molecular Structure. Roč. 1250, č. 2 (2022), č. článku 131828. ISSN 0022-2860. E-ISSN 1872-8014
R&D Projects: GA ČR(CZ) GA17-00121S; GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388963
Keywords : inubosin B * acridine alkaloids, pKa * NMR spectroscopy * UV–vis spectroscopy * surface enhanced Raman scattering * conformation analysis
OECD category: Physical chemistry
Impact factor: 3.8, year: 2022
Method of publishing: Limited access
https://doi.org/10.1016/j.molstruc.2021.131828
Permanent Link: http://hdl.handle.net/11104/0325579 - 4.0540887 - ÚOCHB 2022 RIV AT eng J - Journal Article
Niederhafner, Petr - Šafařík, Martin - Neburková, Jitka - Keiderling, T. A. - Bouř, Petr - Šebestík, Jaroslav
Monitoring peptide tyrosine nitration by spectroscopic methods.
Amino Acids. Roč. 53, č. 4 (2021), s. 517-532. ISSN 0939-4451. E-ISSN 1438-2199
R&D Projects: GA ČR(CZ) GA14-00431S; GA ČR(CZ) GA17-00121S; GA ČR(CZ) GA20-10144S; GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388963
Keywords : nitration * oxidative stress * surface-enhanced Raman spectroscopy (SERS) * vibrational circular dichroism (VCD) * electronic circular dichroism (ECD) * density functional theory (DFT)
OECD category: Physical chemistry
Impact factor: 3.789, year: 2021
Method of publishing: Limited access
https://doi.org/10.1007/s00726-020-02911-7
Permanent Link: http://hdl.handle.net/11104/0318490 - 5.0535965 - ÚOCHB 2021 RIV GB eng J - Journal Article
Hamissa, Mohamed Farouk - Niederhafner, Petr - Šafařík, Martin - Telus, M. - Kolářová, Lenka - Koutná, Leah - Šestáková, H. - Souček, Radko - Šebestík, Jaroslav
Total synthesis of inubosin B.
Tetrahedron Letters. Roč. 61, č. 52 (2020), č. článku 152641. ISSN 0040-4039. E-ISSN 1873-3581
R&D Projects: GA ČR(CZ) GA17-00121S; GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388963
Keywords : neuroregeneration * neurodegeneration * acridine * alkaloid * total synthesis
OECD category: Biophysics
Impact factor: 2.415, year: 2020
Method of publishing: Limited access
https://doi.org/10.1016/j.tetlet.2020.152641
Permanent Link: http://hdl.handle.net/11104/0313970 - 6.0480247 - ÚOCHB 2018 RIV US eng J - Journal Article
Jungwirth, Jakub - Šebestík, Jaroslav - Šafařík, Martin - Kapitán, J. - Bouř, Petr
Quantitative Determination of Ala-Ala Conformer Ratios in Solution by Decomposition of Raman Optical Activity Spectra.
Journal of Physical Chemistry B. Roč. 121, č. 38 (2017), s. 8956-8964. ISSN 1520-6106. E-ISSN 1520-5207
R&D Projects: GA ČR(CZ) GA16-05935S; GA MŠMT(CZ) LTC17012
Grant - others:COST(XE) CA15214
Institutional support: RVO:61388963
Keywords : density functional theory * vibrational circular dichroism * ab initio calculation
OECD category: Physical chemistry
Impact factor: 3.146, year: 2017
Permanent Link: http://hdl.handle.net/11104/0276100 - 7.0477495 - ÚOCHB 2018 RIV GB eng J - Journal Article
Šafařík, Martin - Moško, T. - Zawada, Zbigniew - Šafaříková, E. - Dračínský, Martin - Holada, K. - Šebestík, Jaroslav
Reactivity of 9-aminoacridine drug quinacrine with glutathione limits its antiprion activity.
Chemical Biology & Drug Design. Roč. 89, č. 6 (2017), s. 932-942. ISSN 1747-0277. E-ISSN 1747-0285
R&D Projects: GA ČR(CZ) GA14-00431S; GA ČR GA15-09072S; GA ČR(CZ) GA16-00270S
Institutional support: RVO:61388963
Keywords : antiprion activity * failure in clinical trials * nucleophilic displacement * prion protein binding * quinacrine
OECD category: Physical chemistry
Impact factor: 2.328, year: 2017
Permanent Link: http://hdl.handle.net/11104/0273837 - 8.0463895 - ÚOCHB 2017 RIV DE eng J - Journal Article
Štěpánek, P. - Cowie, T. Y. - Šafařík, Martin - Šebestík, Jaroslav - Pohl, Radek - Bouř, Petr
Resolving Electronic Transitions in Synthetic Fluorescent Protein Chromophores by Magnetic Circular Dichroism.
ChemPhysChem. Roč. 17, č. 15 (2016), s. 2348-2354. ISSN 1439-4235. E-ISSN 1439-7641
R&D Projects: GA ČR GA13-03978S; GA ČR(CZ) GA16-05935S
Institutional support: RVO:61388963
Keywords : density functional calculations * fluorescence protein chromophores * magnetic circular dichroism * organic synthesis * spectral simulations
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 3.075, year: 2016
Permanent Link: http://hdl.handle.net/11104/0262978 - 9.0459208 - ÚOCHB 2017 RIV AT eng J - Journal Article
Niederhafner, Petr - Šafařík, Martin - Brichtová, Eva - Šebestík, Jaroslav
Rapid acidolysis of benzyl group as a suitable approach for syntheses of peptides naturally produced by oxidative stress and containing 3-nitrotyrosine.
Amino Acids. Roč. 48, č. 4 (2016), s. 1087-1098. ISSN 0939-4451. E-ISSN 1438-2199
R&D Projects: GA ČR(CZ) GA14-00431S
Institutional support: RVO:61388963
Keywords : nitrotyrosine * peptide synthesis * alpha-synuclein * reaction rate
Subject RIV: CE - Biochemistry
Impact factor: 3.173, year: 2016
Permanent Link: http://hdl.handle.net/11104/0259441 - 10.0424007 - ÚOCHB 2014 RIV US eng J - Journal Article
Sedlák, František - Šácha, Pavel - Blechová, Miroslava - Březinová, Anna - Šafařík, Martin - Šebestík, Jaroslav - Konvalinka, Jan
Glutamate carboxypeptidase II does not process amyloid-beta peptide.
FASEB Journal. Roč. 27, č. 7 (2013), s. 2626-2632. ISSN 0892-6638. E-ISSN 1530-6860
R&D Projects: GA ČR GAP304/12/0847
Institutional support: RVO:61388963
Keywords : PSMA * Alzheimer's disease * disaggregation * exopeptidase * substrate specificity * depsipeptide
Subject RIV: CE - Biochemistry
Impact factor: 5.480, year: 2013
Permanent Link: http://hdl.handle.net/11104/0230161