Search results

  1. 1.
    0563907 - ÚOCHB 2023 RIV GB eng J - Journal Article
    Sebechlebská, T. - Kolivoška, V. - Šebera, Jakub - Fukal, Jiří - Řeha, D. - Buděšínský, Miloš - Rosenberg, Ivan - Bednárová, Lucie - Gasior, J. - Mészáros, G. - Hromadová, M. - Sychrovský, Vladimír
    Additive transport in DNA molecular circuits.
    Journal of Materials Chemistry C. Roč. 10, č. 33 (2022), s. 12022-12031. ISSN 2050-7526. E-ISSN 2050-7534
    R&D Projects: GA ČR(CZ) GA18-14990S
    Institutional support: RVO:61388963
    Keywords : photoinduced electron-transfer * HG-II-T * charge-transport
    OECD category: Biophysics
    Impact factor: 6.4, year: 2022
    Method of publishing: Open access
    https://doi.org/10.1039/D2TC01219G
    Permanent Link: https://hdl.handle.net/11104/0335690
     
     
  2. 2.
    0552686 - ÚOCHB 2023 RIV GB eng J - Journal Article
    Lášek, Tomáš - Petrová, Magdalena - Markusová Kóšiová, Ivana - Šimák, Ondřej - Buděšínský, Miloš - Kozák, Jaroslav - Snášel, Jan - Vavřina, Zdeněk - Birkuš, Gabriel - Rosenberg, Ivan - Páv, Ondřej
    5′-Phosphonate modified oligoadenylates as potent activators of human RNase L.
    Bioorganic & Medicinal Chemistry. Roč. 56, Feb 15 (2022), č. článku 116632. ISSN 0968-0896. E-ISSN 1464-3391
    R&D Projects: GA MŠMT(CZ) EF16_019/0000729
    Institutional support: RVO:61388963
    Keywords : RNase L * Oligoadenylate * Phosphonate oligonucleotide * OAS-RNase L pathway * 2-5A
    OECD category: Biochemistry and molecular biology
    Impact factor: 3.5, year: 2022
    Method of publishing: Limited access
    https://doi.org/10.1016/j.bmc.2022.116632
    Permanent Link: http://hdl.handle.net/11104/0327809
     
     
  3. 3.
    0547495 - ÚOCHB 2022 RIV GB eng J - Journal Article
    Ligasová, A. - Rosenberg, Ivan - Bocková, Markéta - Homola, Jiří - Koberna, K.
    Anchored linear oligonucleotides: the effective tool for the real-time measurement of uracil DNA glycosylase activity.
    Open Biology. Roč. 11, č. 10 (2021), č. článku 210136. E-ISSN 2046-2441
    R&D Projects: GA TA ČR(CZ) TN01000013; GA MŠMT(CZ) LM2018133; GA MZd NV15-31604A; GA ČR(CZ) GA19-02739S
    Institutional support: RVO:61388963 ; RVO:67985882
    Keywords : uracil DNA glycosylase * base excision repair * immobilized oligonucleotides * immobilized oligonucleotides * Förster resonance energy transfer * surface plasmon resonance
    OECD category: Biochemistry and molecular biology; Optics (including laser optics and quantum optics) (URE-Y)
    Impact factor: 7.000, year: 2021
    Method of publishing: Open access
    https://doi.org/10.1098/rsob.210136
    Permanent Link: http://hdl.handle.net/11104/0323709
     
     
  4. 4.
    0543389 - ÚOCHB 2022 RIV GB eng J - Journal Article
    Lášek, Tomáš - Dobiaš, Juraj - Buděšínský, Miloš - Kozák, Jaroslav - Lapuníková, Barbora - Rosenberg, Ivan - Birkuš, Gabriel - Páv, Ondřej
    Synthesis of phosphonate derivatives of 2′-deoxy-2′-fluorotetradialdose D-nucleosides and tetradialdose D-nucleosides.
    Tetrahedron. Roč. 89, Jun 4 (2021), č. článku 132159. ISSN 0040-4020. E-ISSN 1464-5416
    R&D Projects: GA MŠMT(CZ) EF16_019/0000729
    Institutional support: RVO:61388963
    Keywords : nucleoside phosphonate * triphosphate * prodrug * tetradialdose d-nucleoside * 2′-fluoronucleoside
    OECD category: Organic chemistry
    Impact factor: 2.388, year: 2021
    Method of publishing: Limited access
    https://doi.org/10.1016/j.tet.2021.132159
    Permanent Link: http://hdl.handle.net/11104/0320603
     
     
  5. 5.
    0542802 - BFÚ 2022 RIV GB eng J - Journal Article
    Zivkovic, M.L. - Gajarský, M. - Bekova, K. - Stadlbauer, Petr - Vicherek, L. - Petrová, Magdalena - Fiala, R. - Rosenberg, Ivan - Šponer, Jiří - Plavec, J. - Trantírek, L.
    Insight into formation propensity of pseudocircular DNA G-hairpins.
    Nucleic Acids Research. Roč. 49, č. 4 (2021), s. 2317-2332. ISSN 0305-1048. E-ISSN 1362-4962
    R&D Projects: GA ČR(CZ) GA17-12703S; GA MŠMT EF15_003/0000477
    Institutional support: RVO:68081707 ; RVO:61388963
    Keywords : molecular-dynamics simulations * g-quadruplex structure * amber force-field * g-triplex * folding pathways
    OECD category: Biochemistry and molecular biology; Biochemistry and molecular biology (UOCHB-X)
    Impact factor: 19.160, year: 2021
    Method of publishing: Open access
    https://academic.oup.com/nar/article/49/4/2317/6125665
    Permanent Link: http://hdl.handle.net/11104/0320148
     
     
  6. 6.
    0507296 - ÚOCHB 2020 RIV GB eng J - Journal Article
    Fukal, Jiří - Páv, Ondřej - Buděšínský, Miloš - Rosenberg, Ivan - Šebera, Jakub - Sychrovský, Vladimír
    Structural interpretation of the 31P NMR chemical shifts in thiophosphate and phosphate: key effects due to spin-orbit and explicit solvent.
    Physical Chemistry Chemical Physics. Roč. 21, č. 19 (2019), s. 9924-9934. ISSN 1463-9076. E-ISSN 1463-9084
    R&D Projects: GA ČR(CZ) GA19-13436S
    Institutional support: RVO:61388963
    Keywords : correlated molecular calculations * density functional methods * Gaussian basis sets
    OECD category: Physical chemistry
    Impact factor: 3.430, year: 2019
    Method of publishing: Limited access
    https://pubs.rsc.org/en/content/articlelanding/2019/CP/C9CP01460H#!divAbstract
    Permanent Link: http://hdl.handle.net/11104/0298312
     
     
  7. 7.
    0506739 - ÚOCHB 2020 RIV CH eng J - Journal Article
    Kostov, Ondřej - Liboska, Radek - Páv, Ondřej - Novák, Pavel - Rosenberg, Ivan
    Solid-Phase Synthesis of Phosphorothioate/Phosphonothioate and Phosphoramidate/Phosphonamidate Oligonucleotides.
    Molecules. Roč. 24, č. 10 (2019), č. článku 1872. E-ISSN 1420-3049
    R&D Projects: GA ČR(CZ) GA17-12703S
    Institutional support: RVO:61388963
    Keywords : H-phosphinate * H-phosphonate * phosphoramidite * oligonucleotide * phosphonate * phosphorothioate * phosphonothioate * phosphoramidate * phosphonamidate
    OECD category: Organic chemistry
    Impact factor: 3.267, year: 2019
    Method of publishing: Open access
    https://www.mdpi.com/1420-3049/24/10/1872/htm
    Permanent Link: http://hdl.handle.net/11104/0297927
     
     
  8. 8.
    0495604 - ÚOCHB 2019 RIV DE eng J - Journal Article
    Pachl, Petr - Šimák, Ondřej - Buděšínský, Miloš - Brynda, Jiří - Rosenberg, Ivan - Řezáčová, Pavlína
    Structure-Based Optimization of Bisphosphonate Nucleoside Inhibitors of Human 5(3)-deoxyribonucleotidases.
    European Journal of Organic Chemistry. Roč. 2018, č. 37 (2018), s. 5144-5153. ISSN 1434-193X. E-ISSN 1099-0690
    R&D Projects: GA MŠMT(CZ) LO1304
    Institutional support: RVO:61388963
    Keywords : inhibitor design * crystal structures * bisphosphonate nucleoside * enzymes
    OECD category: Organic chemistry
    Impact factor: 3.029, year: 2018
    Permanent Link: http://hdl.handle.net/11104/0288559
     
     
  9. 9.
    0495572 - ÚOCHB 2019 RIV DE eng J - Journal Article
    Kaiser, Martin Maxmilian - Novák, Pavel - Rosenbergová, Šárka - Poštová Slavětínská, Lenka - Rosenberg, Ivan - Janeba, Zlatko
    Acyclic Nucleoside Phosphonates Bearing (R)- or (S)-9-[3-Hydroxy-2-(phosphonoethoxy)propyl] (HPEP) Moiety as Monomers for the Synthesis of Modified Oligonucleotides.
    European Journal of Organic Chemistry. Roč. 2018, č. 37 (2018), s. 5119-5126. ISSN 1434-193X. E-ISSN 1099-0690
    Institutional support: RVO:61388963
    Keywords : nucleobases * oligonucleotides * nonamers * duplexes * hybridization * Tm values
    OECD category: Organic chemistry
    Impact factor: 3.029, year: 2018
    Permanent Link: http://hdl.handle.net/11104/0288521
     
     
  10. 10.
    0485444 - ÚOCHB 2018 RIV GB eng J - Journal Article
    Páv, Ondřej - Buděšínský, Miloš - Rosenberg, Ivan
    Novel phosphanucleoside analogs of dideoxynucleosides.
    Tetrahedron. Roč. 73, č. 34 (2017), s. 5220-5228. ISSN 0040-4020. E-ISSN 1464-5416
    R&D Projects: GA ČR(CZ) GA17-12703S; GA ČR GA13-26526S; GA MZd NV15-31604A
    Institutional support: RVO:61388963
    Keywords : phosphanucleoside * nucleoside analog * ring-closing metathesis * stereoselective hydroboration * chiral resolution
    OECD category: Organic chemistry
    Impact factor: 2.377, year: 2017
    Permanent Link: http://hdl.handle.net/11104/0280473
     
     

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