Search results
- 1.0563907 - ÚOCHB 2023 RIV GB eng J - Journal Article
Sebechlebská, T. - Kolivoška, V. - Šebera, Jakub - Fukal, Jiří - Řeha, D. - Buděšínský, Miloš - Rosenberg, Ivan - Bednárová, Lucie - Gasior, J. - Mészáros, G. - Hromadová, M. - Sychrovský, Vladimír
Additive transport in DNA molecular circuits.
Journal of Materials Chemistry C. Roč. 10, č. 33 (2022), s. 12022-12031. ISSN 2050-7526. E-ISSN 2050-7534
R&D Projects: GA ČR(CZ) GA18-14990S
Institutional support: RVO:61388963
Keywords : photoinduced electron-transfer * HG-II-T * charge-transport
OECD category: Biophysics
Impact factor: 6.4, year: 2022
Method of publishing: Open access
https://doi.org/10.1039/D2TC01219G
Permanent Link: https://hdl.handle.net/11104/0335690 - 2.0552686 - ÚOCHB 2023 RIV GB eng J - Journal Article
Lášek, Tomáš - Petrová, Magdalena - Markusová Kóšiová, Ivana - Šimák, Ondřej - Buděšínský, Miloš - Kozák, Jaroslav - Snášel, Jan - Vavřina, Zdeněk - Birkuš, Gabriel - Rosenberg, Ivan - Páv, Ondřej
5′-Phosphonate modified oligoadenylates as potent activators of human RNase L.
Bioorganic & Medicinal Chemistry. Roč. 56, Feb 15 (2022), č. článku 116632. ISSN 0968-0896. E-ISSN 1464-3391
R&D Projects: GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388963
Keywords : RNase L * Oligoadenylate * Phosphonate oligonucleotide * OAS-RNase L pathway * 2-5A
OECD category: Biochemistry and molecular biology
Impact factor: 3.5, year: 2022
Method of publishing: Limited access
https://doi.org/10.1016/j.bmc.2022.116632
Permanent Link: http://hdl.handle.net/11104/0327809 - 3.0547495 - ÚOCHB 2022 RIV GB eng J - Journal Article
Ligasová, A. - Rosenberg, Ivan - Bocková, Markéta - Homola, Jiří - Koberna, K.
Anchored linear oligonucleotides: the effective tool for the real-time measurement of uracil DNA glycosylase activity.
Open Biology. Roč. 11, č. 10 (2021), č. článku 210136. E-ISSN 2046-2441
R&D Projects: GA TA ČR(CZ) TN01000013; GA MŠMT(CZ) LM2018133; GA MZd NV15-31604A; GA ČR(CZ) GA19-02739S
Institutional support: RVO:61388963 ; RVO:67985882
Keywords : uracil DNA glycosylase * base excision repair * immobilized oligonucleotides * immobilized oligonucleotides * Förster resonance energy transfer * surface plasmon resonance
OECD category: Biochemistry and molecular biology; Optics (including laser optics and quantum optics) (URE-Y)
Impact factor: 7.000, year: 2021
Method of publishing: Open access
https://doi.org/10.1098/rsob.210136
Permanent Link: http://hdl.handle.net/11104/0323709 - 4.0543389 - ÚOCHB 2022 RIV GB eng J - Journal Article
Lášek, Tomáš - Dobiaš, Juraj - Buděšínský, Miloš - Kozák, Jaroslav - Lapuníková, Barbora - Rosenberg, Ivan - Birkuš, Gabriel - Páv, Ondřej
Synthesis of phosphonate derivatives of 2′-deoxy-2′-fluorotetradialdose D-nucleosides and tetradialdose D-nucleosides.
Tetrahedron. Roč. 89, Jun 4 (2021), č. článku 132159. ISSN 0040-4020. E-ISSN 1464-5416
R&D Projects: GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388963
Keywords : nucleoside phosphonate * triphosphate * prodrug * tetradialdose d-nucleoside * 2′-fluoronucleoside
OECD category: Organic chemistry
Impact factor: 2.388, year: 2021
Method of publishing: Limited access
https://doi.org/10.1016/j.tet.2021.132159
Permanent Link: http://hdl.handle.net/11104/0320603 - 5.0542802 - BFÚ 2022 RIV GB eng J - Journal Article
Zivkovic, M.L. - Gajarský, M. - Bekova, K. - Stadlbauer, Petr - Vicherek, L. - Petrová, Magdalena - Fiala, R. - Rosenberg, Ivan - Šponer, Jiří - Plavec, J. - Trantírek, L.
Insight into formation propensity of pseudocircular DNA G-hairpins.
Nucleic Acids Research. Roč. 49, č. 4 (2021), s. 2317-2332. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GA17-12703S; GA MŠMT EF15_003/0000477
Institutional support: RVO:68081707 ; RVO:61388963
Keywords : molecular-dynamics simulations * g-quadruplex structure * amber force-field * g-triplex * folding pathways
OECD category: Biochemistry and molecular biology; Biochemistry and molecular biology (UOCHB-X)
Impact factor: 19.160, year: 2021
Method of publishing: Open access
https://academic.oup.com/nar/article/49/4/2317/6125665
Permanent Link: http://hdl.handle.net/11104/0320148 - 6.0507296 - ÚOCHB 2020 RIV GB eng J - Journal Article
Fukal, Jiří - Páv, Ondřej - Buděšínský, Miloš - Rosenberg, Ivan - Šebera, Jakub - Sychrovský, Vladimír
Structural interpretation of the 31P NMR chemical shifts in thiophosphate and phosphate: key effects due to spin-orbit and explicit solvent.
Physical Chemistry Chemical Physics. Roč. 21, č. 19 (2019), s. 9924-9934. ISSN 1463-9076. E-ISSN 1463-9084
R&D Projects: GA ČR(CZ) GA19-13436S
Institutional support: RVO:61388963
Keywords : correlated molecular calculations * density functional methods * Gaussian basis sets
OECD category: Physical chemistry
Impact factor: 3.430, year: 2019
Method of publishing: Limited access
https://pubs.rsc.org/en/content/articlelanding/2019/CP/C9CP01460H#!divAbstract
Permanent Link: http://hdl.handle.net/11104/0298312 - 7.0506739 - ÚOCHB 2020 RIV CH eng J - Journal Article
Kostov, Ondřej - Liboska, Radek - Páv, Ondřej - Novák, Pavel - Rosenberg, Ivan
Solid-Phase Synthesis of Phosphorothioate/Phosphonothioate and Phosphoramidate/Phosphonamidate Oligonucleotides.
Molecules. Roč. 24, č. 10 (2019), č. článku 1872. E-ISSN 1420-3049
R&D Projects: GA ČR(CZ) GA17-12703S
Institutional support: RVO:61388963
Keywords : H-phosphinate * H-phosphonate * phosphoramidite * oligonucleotide * phosphonate * phosphorothioate * phosphonothioate * phosphoramidate * phosphonamidate
OECD category: Organic chemistry
Impact factor: 3.267, year: 2019
Method of publishing: Open access
https://www.mdpi.com/1420-3049/24/10/1872/htm
Permanent Link: http://hdl.handle.net/11104/0297927 - 8.0495604 - ÚOCHB 2019 RIV DE eng J - Journal Article
Pachl, Petr - Šimák, Ondřej - Buděšínský, Miloš - Brynda, Jiří - Rosenberg, Ivan - Řezáčová, Pavlína
Structure-Based Optimization of Bisphosphonate Nucleoside Inhibitors of Human 5(3)-deoxyribonucleotidases.
European Journal of Organic Chemistry. Roč. 2018, č. 37 (2018), s. 5144-5153. ISSN 1434-193X. E-ISSN 1099-0690
R&D Projects: GA MŠMT(CZ) LO1304
Institutional support: RVO:61388963
Keywords : inhibitor design * crystal structures * bisphosphonate nucleoside * enzymes
OECD category: Organic chemistry
Impact factor: 3.029, year: 2018
Permanent Link: http://hdl.handle.net/11104/0288559 - 9.0495572 - ÚOCHB 2019 RIV DE eng J - Journal Article
Kaiser, Martin Maxmilian - Novák, Pavel - Rosenbergová, Šárka - Poštová Slavětínská, Lenka - Rosenberg, Ivan - Janeba, Zlatko
Acyclic Nucleoside Phosphonates Bearing (R)- or (S)-9-[3-Hydroxy-2-(phosphonoethoxy)propyl] (HPEP) Moiety as Monomers for the Synthesis of Modified Oligonucleotides.
European Journal of Organic Chemistry. Roč. 2018, č. 37 (2018), s. 5119-5126. ISSN 1434-193X. E-ISSN 1099-0690
Institutional support: RVO:61388963
Keywords : nucleobases * oligonucleotides * nonamers * duplexes * hybridization * Tm values
OECD category: Organic chemistry
Impact factor: 3.029, year: 2018
Permanent Link: http://hdl.handle.net/11104/0288521 - 10.0485444 - ÚOCHB 2018 RIV GB eng J - Journal Article
Páv, Ondřej - Buděšínský, Miloš - Rosenberg, Ivan
Novel phosphanucleoside analogs of dideoxynucleosides.
Tetrahedron. Roč. 73, č. 34 (2017), s. 5220-5228. ISSN 0040-4020. E-ISSN 1464-5416
R&D Projects: GA ČR(CZ) GA17-12703S; GA ČR GA13-26526S; GA MZd NV15-31604A
Institutional support: RVO:61388963
Keywords : phosphanucleoside * nucleoside analog * ring-closing metathesis * stereoselective hydroboration * chiral resolution
OECD category: Organic chemistry
Impact factor: 2.377, year: 2017
Permanent Link: http://hdl.handle.net/11104/0280473