Search results
- 1.0373405 - BFÚ 2012 RIV GB eng J - Journal Article
Réblová, Kamila - Rázga, Filip - Li, W. - Gao, H. - Frank, J. - Šponer, Jiří
Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM.
Nucleic Acids Research. Roč. 38, č. 4 (2010), s. 1325-1340. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT(CZ) LC06030
Keywords : molecular dynamics * Cryo-electron microscopy * RNA
Subject RIV: BO - Biophysics
Impact factor: 7.836, year: 2010
Permanent Link: http://hdl.handle.net/11104/0206513 - 2.0344070 - BFÚ 2011 RIV GB eng J - Journal Article
Réblová, Kamila - Rázga, Filip - Li, W. - Gao, H. - Frank, J. - Šponer, Jiří
Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM.
Nucleic Acids Research. Roč. 38, č. 4 (2010), s. 1325-1340. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT(CZ) LC06030; GA AV ČR(CZ) KJB400040901; GA AV ČR(CZ) 1QS500040581; GA AV ČR(CZ) IAA400040802; GA ČR(CZ) GA203/09/1476
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : molecular dynamics * Cryo-electron microscopy * RNA
Subject RIV: BO - Biophysics
Impact factor: 7.836, year: 2010
Permanent Link: http://hdl.handle.net/11104/0186380 - 3.0087248 - BFÚ 2008 RIV GB eng J - Journal Article
Rázga, Filip - Koča, J. - Mokdad, A. - Šponer, Jiří
Elastic properties of ribosomal RNA building blocks: Molecular dynamics of the GTPase-associated center rRNA.
[Elastické vlastnosti stavebních bloků rRNA: molekulární dynamika GTPase-associated center rRNA.]
Nucleic Acids Research. Roč. 35, č. 12 (2007), s. 4007-4017. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT(CZ) LC06030; GA ČR(CZ) GA203/05/0388; GA ČR(CZ) GA203/05/0009; GA AV ČR(CZ) 1QS500040581
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : molecular dynamics * RNA building blocks * ribosome
Subject RIV: BO - Biophysics
Impact factor: 6.954, year: 2007
Permanent Link: http://hdl.handle.net/11104/0149145 - 4.0040366 - BFÚ 2007 RIV US eng J - Journal Article
Réblová, Kamila - Lankaš, F. - Rázga, Filip - Krasovská, Maryna V. - Koča, J. - Šponer, Jiří
Structure, dynamics, and elasticity of free 16S rRNA helix 44 studied by molecular dynamics simulations.
[Struktura, dynamika a elasticita volného helixu 44 ze 16S rRNA studovaného molekulárně dynamickými simulacemi.]
Biopolymers. Roč. 82, č. 5 (2006), s. 504-520. ISSN 0006-3525. E-ISSN 1097-0282
R&D Projects: GA ČR(CZ) GA203/05/0388; GA ČR(CZ) GA203/05/0009; GA ČR(CZ) GD204/03/H016; GA MŠMT(CZ) LC512
Institutional research plan: CEZ:AV0Z50040507
Keywords : molecular dynamics * helix 44 * 16S rRNA
Subject RIV: BO - Biophysics
Impact factor: 2.480, year: 2006
Permanent Link: http://hdl.handle.net/11104/0134103 - 5.0039256 - BFÚ 2007 RIV GB eng J - Journal Article
Rázga, Filip - Zacharias, M. - Réblová, Kamila - Koča, J. - Šponer, Jiří
RNA Kink-turns as molecular elbows: Hydration, cation binding, and large-scale dynamics.
[RNA Kink-turny jako molekulární klouby: Hydratace, vázání kationů a rozsáhlá dynamika.]
Structure. Roč. 14, č. 5 (2006), s. 825-835. ISSN 0969-2126. E-ISSN 1878-4186
R&D Projects: GA ČR(CZ) GA203/05/0388; GA ČR(CZ) GA203/05/0009; GA MŠMT(CZ) LC512; GA AV ČR(CZ) 1QS500040581
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z40550506
Keywords : molecular dynamics * Kink-turn motif * ribosome dynamics
Subject RIV: BO - Biophysics
Impact factor: 5.738, year: 2006
Permanent Link: http://hdl.handle.net/11104/0133399 - 6.0024076 - BFÚ 2006 RIV CZ eng J - Journal Article
Rázga, Filip - Špačková, Naďa - Réblová, K. - Koča, J. - Leontis, Neocles B. - Šponer, Jiří
Ribosomal RNA Kink-turn motif - a flexible molecular hinge.
[Ribozomální Kink-turn motiv - flexibilní molekulární klb.]
Materials Structure. Roč. 12, č. 1 (2005), s. 38-38. ISSN 1211-5894.
[Setkání českých a slovenských strukturních biologů 2005. Nové Hrady, 15.09.2005-20.09.2005]
Institutional research plan: CEZ:AV0Z50040507
Keywords : Kink-turn motif
Subject RIV: BO - Biophysics
Permanent Link: http://hdl.handle.net/11104/0114679 - 7.0021193 - BFÚ 2006 RIV US eng J - Journal Article
Rázga, Filip - Koča, Jaroslav - Šponer, Jiří - Leontis, Neocles B.
Hinge-like motions in RNA Kink-turns: The role of the second A-minor motif and nominally unpaired bases.
[Kloubové pohyby RNA Kink-turnů: Úloha druhého A-minor motivu a formálně nespárovaných nukleotidů.]
Biophysical Journal. Roč. 88, č. 5 (2005), s. 3466-3485. ISSN 0006-3495. E-ISSN 1542-0086
R&D Projects: GA ČR(CZ) GA203/05/0009
Institutional research plan: CEZ:AV0Z50040507
Keywords : large ribosomal sub-unit * molecular dynamics * RNA flexibility
Subject RIV: BO - Biophysics
Impact factor: 4.507, year: 2005
Permanent Link: http://hdl.handle.net/11104/0110196