Search results
- 1.0576187 - ÚOCHB 2024 RIV US eng J - Journal Article
Tesařová, M. - Boušková, T. - Cejnar, P. - Šantrůček, J. - Peterková, L. - Fík, Z. - Sázelová, Petra - Kašička, Václav - Hynek, R.
Characterization of vestibular schwannoma tissues using liquid chromatography-tandem mass spectrometry analysis of specific peptide fragments separated by in-sample tryptic protein digestion followed by mathematical analysis.
Journal of Separation Science. Roč. 46, č. 22 (2023), č. článku 2300543. ISSN 1615-9306. E-ISSN 1615-9314
Institutional support: RVO:61388963
Keywords : in-sample protein digestion * liquid chromatography * principal component analysis * tandem mass spectrometry * vestibular schwannomas
OECD category: Analytical chemistry
Impact factor: 3.1, year: 2022
Method of publishing: Open access
https://doi.org/10.1002/jssc.202300543
Permanent Link: https://hdl.handle.net/11104/0345778
Research data: PRIDE - 2.0569350 - ÚMG 2024 RIV CH eng J - Journal Article
Tesařová, M. - Peterková, L. - Šťastná, Monika - Kolář, Michal - Lacina, L. - Smetana Jr., K. - Hynek, R. - Betka, J. - Vlasák, A. - Lukeš, P. - Fík, Z.
Tumor Biology and Microenvironment of Vestibular Schwannoma-Relation to Tumor Growth and Hearing Loss.
Biomedicines. Roč. 11, č. 1 (2023), č. článku 32. E-ISSN 2227-9059
R&D Projects: GA MŠMT LX22NPO5102; GA MŠMT(CZ) EF16_019/0000785
Institutional support: RVO:68378050
Keywords : VS * tumor microenvironment * tumor growth * hearing loss
OECD category: Biochemistry and molecular biology
Impact factor: 4.7, year: 2022
Method of publishing: Open access
https://www.mdpi.com/2227-9059/11/1/32
Permanent Link: https://hdl.handle.net/11104/0341882File Download Size Commentary Version Access biomedicines-Tesarova_M-23.pdf 2 2.4 MB Publisher’s postprint open-access - 3.0563451 - ÚOCHB 2023 RIV DE eng J - Journal Article
Michalus, I. - Van Nguyen, T. - Viktorová, J. - Cejnar, P. - Šantrůček, J. - Kučková, Š. - Sázelová, Petra - Kašička, Václav - Hynek, R.
Liquid chromatography-tandem mass spectrometry analysis of peptides separated from the insoluble matrix by in-sample tryptic protein digestion for rapid discrimination of various induced pathological states of human bone models in oral surgery.
Journal of Separation Science. Roč. 45, č. 24 (2022), s. 4388-4396. ISSN 1615-9306. E-ISSN 1615-9314
Institutional support: RVO:61388963
Keywords : liquid chromatography * mass spectrometry * protein digestion * cancer * inflammation * in-sample protein digestion
OECD category: Analytical chemistry
Impact factor: 3.1, year: 2022
Method of publishing: Limited access
https://doi.org/10.1002/jssc.202200694
Permanent Link: https://hdl.handle.net/11104/0335409 - 4.0545929 - ÚOCHB 2022 RIV DE eng J - Journal Article
Hynek, R. - Michalus, I. - Cejnar, P. - Šantrůček, J. - Seidlová, S. - Kučková, Š. - Sázelová, Petra - Kašička, Václav
In-bone protein digestion followed by LC-MS/MS peptide analysis as a new way towards the routine proteomic characterization of human maxillary and mandibular bone tissue in oral surgery.
Electrophoresis. Roč. 42, č. 23 (2021), s. 2552-2562. ISSN 0173-0835. E-ISSN 1522-2683
R&D Projects: GA ČR(CZ) GA18-02597S
Institutional support: RVO:61388963
Keywords : in-bone protein digestion * LC-MS/MS * mandibular bone * maxillary bone * oral surgery * peptide mapping
OECD category: Analytical chemistry
Impact factor: 3.595, year: 2021
Method of publishing: Limited access
https://doi.org/10.1002/elps.202100211
Permanent Link: http://hdl.handle.net/11104/0322537 - 5.0532117 - ÚOCHB 2021 RIV DE eng J - Journal Article
Michalusová, I. - Sázelová, Petra - Cejnar, P. - Kučková, Š. - Hynek, R. - Kašička, Václav
Capillary electrophoretic profiling of in‐bone tryptic digests of proteins as a potential tool for the detection of inflammatory states in oral surgery.
Journal of Separation Science. Roč. 43, č. 20 (2020), s. 3949-3959. ISSN 1615-9306. E-ISSN 1615-9314
R&D Projects: GA ČR(CZ) GA20-03899S
Institutional support: RVO:61388963
Keywords : alveolar bones * capillary electrophoresis * in-bone protein digestion * linear discriminant analysis * principal component analysis
OECD category: Analytical chemistry
Impact factor: 3.645, year: 2020
Method of publishing: Limited access
https://doi.org/10.1002/jssc.202000718
Permanent Link: http://hdl.handle.net/11104/0310717 - 6.0492287 - ÚEB 2019 RIV CH eng J - Journal Article
Junková, P. - Daněk, Michal - Kocourková, Daniela - Brouzdová, Jitka - Kroumanová, Kristýna - Zelazny, E. - Janda, Martin - Hynek, R. - Martinec, Jan - Valentová, O.
Mapping of Plasma Membrane Proteins Interacting With Arabidopsis thaliana Flotillin 2.
Frontiers in Plant Science. Roč. 9, JUL 12 (2018), č. článku 991. ISSN 1664-462X. E-ISSN 1664-462X
R&D Projects: GA ČR GA14-09685S; GA MŠMT(CZ) 7AMB17FR005
Institutional support: RVO:61389030
Keywords : hypersensitive-induced reaction * independent endocytic pathway * syringae pv. tomato * mass-spectrometry * affinity-purification * lipid rafts * cell-death * h+-atpase * in-vivo * signal-transduction * Arabidopsis flotillin 2 * protein-protein interactions * immunopurification * mass spectrometry * splitubiquitin yeast system * plant-pathogen interaction * water transport * intracellular trafficking
OECD category: Cell biology
Impact factor: 4.106, year: 2018
Permanent Link: http://hdl.handle.net/11104/0285808File Download Size Commentary Version Access 2018_Junkova_FRONTIERS IN PLANT SCIENCE_991.pdf 6 3.6 MB Other open-access - 7.0472450 - ÚTAM 2017 RIV US eng J - Journal Article
Kučková, Š. - Šantrůček, J. - Adamec, M. - Hynek, R. - Zeman, Antonín
Chemical analysis of Gothic mortar from a bridge pier in Roudnice nad Labem (Czech Republic).
Journal of Liquid Chromatography & Related Technologies. Roč. 39, č. 16 (2016), s. 739-744. ISSN 1082-6076. E-ISSN 1520-572X
Institutional support: RVO:68378297
Keywords : gothic bridge * inorganic composition * mortars * peptide mass mapping * protein additive * proteolytic digestion
Subject RIV: AL - Art, Architecture, Cultural Heritage
Impact factor: 0.697, year: 2016
http://www.tandfonline.com/doi/abs/10.1080/10826076.2016.1238394?journalCode=ljlc20
Permanent Link: http://hdl.handle.net/11104/0269758 - 8.0472354 - ÚOCHB 2017 RIV US eng J - Journal Article
Junková, P. - Prchal, J. - Spiwok, V. - Pleskot, Roman - Kadlec, Jan - Krásný, L. - Hynek, R. - Hrabal, R. - Ruml, T.
Molecular aspects of the interaction between Mason-Pfizer monkey virus matrix protein and artificial phospholipid membrane.
Proteins-Structure, Function and Bioinformatics. Roč. 84, č. 11 (2016), s. 1717-1727. ISSN 0887-3585. E-ISSN 1097-0134
Institutional support: RVO:61388963
Keywords : covalent labelling * mass spectrometry * multiscale molecular dynamics * protein-membrane interaction * phosphatidylinositol-(4,5)-bisphosphate * liposomes
Subject RIV: CE - Biochemistry
Impact factor: 2.289, year: 2016
Permanent Link: http://hdl.handle.net/11104/0269678 - 9.0466205 - ÚEB 2017 RIV US eng J - Journal Article
Junková, P. - Prchal, J. - Spiwok, V. - Pleskot, Roman - Kadlec, J. - Krásný, Libor - Hynek, R. - Hrabal, R. - Ruml, T.
Molecular aspects of the interaction between MasonPfizer monkey virus matrix protein and artificial phospholipid membrane.
Proteins-Structure, Function and Bioinformatics. Roč. 84, č. 11 (2016), s. 1717-1727. ISSN 0887-3585. E-ISSN 1097-0134
Institutional support: RVO:61389030 ; RVO:61388971
Keywords : d-type retrovirus * force-field * nucleotide-sequence * myristate exposure * plasma-membrane * rhesus monkey
Subject RIV: EB - Genetics ; Molecular Biology; EE - Microbiology, Virology (MBU-M)
Impact factor: 2.289, year: 2016
Permanent Link: http://hdl.handle.net/11104/0264911File Download Size Commentary Version Access 2016_Junkova_PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS_1717.pdf 2 401.5 KB Other open-access - 10.0455548 - MBÚ 2016 RIV GB eng J - Journal Article
Krásný, Lukáš - Pompach, Petr - Strnadová, Marcela - Hynek, R. - Vališ, K. - Havlíček, Vladimír - Novák, Petr - Volný, M.
High-throughput workflow for identification of phosphorylated peptides by LC-MALDI-TOF/TOF-MS coupled to in situ enrichment on MALDI plates functionalized by ion landing.
Journal of Mass Spectrometry. Roč. 50, č. 6 (2015), s. 802-811. ISSN 1076-5174. E-ISSN 1096-9888
R&D Projects: GA MŠMT(CZ) EE2.3.20.0055; GA MŠMT(CZ) EE2.3.30.0003; GA MŠMT(CZ) ED1.1.00/02.0109; GA ČR GPP206/10/P018; GA ČR(CZ) GAP206/12/1150; GA ČR(CZ) GP14-21095P; GA ČR GA13-16565S; GA MŠMT LH13051
Grant - others:OPPC(XE) CZ.2.16/3.1.00/24023
Institutional support: RVO:61388971
Keywords : phosphopeptides * MALDI * enrichment
Subject RIV: CE - Biochemistry
Impact factor: 2.541, year: 2015
Permanent Link: http://hdl.handle.net/11104/0256163