Search results
- 1.0503670 - ÚI 2020 RIV CZ eng J - Journal Article
Duintjer Tebbens, Jurjen - Matonoha, Ctirad - Matthios, A. - Papáček, Š.
On Parameter Estimation in an In Vitro Compartmental Model for Drug-Induced Enzyme Production in Pharmacotherapy.
Applications of Mathematics. Roč. 64, č. 2 (2019), s. 253-277. ISSN 0862-7940. E-ISSN 1572-9109
Grant - others:CENAKVA(CZ) CZ.1.05/2.1.00/01.0024; GA MŠk(CZ) LO1205; CENAKVA(CZ) CZ.1.05/2.1.00/19.0380
Institutional support: RVO:67985807
Keywords : pharmacotherapy * pharmacodynamic modelling * constrained optimization * parameter estimation
OECD category: Pure mathematics
Impact factor: 0.544, year: 2019
Method of publishing: Open access with time embargo
https://articles.math.cas.cz/10.21136/AM.2019.0284-18
Permanent Link: http://hdl.handle.net/11104/0295480 - 2.0473666 - ÚI 2018 RIV GB eng J - Journal Article
Papáček, Š. - Macdonald, B. - Matonoha, Ctirad
Closed-Form Formulas vs. PDE Based Numerical Solution for the FRAP Data Processing: Theoretical and Practical Comparison.
Computers & Mathematics With Applications. Roč. 73, č. 8 (2017), s. 1673-1683. ISSN 0898-1221. E-ISSN 1873-7668
Grant - others:GA MŠk(CZ) ED2.1.00/01.0024; GA MŠk(CZ) LO1205
Institutional support: RVO:67985807
Keywords : fluorescence recovery after photobleaching (FRAP) * parameter estimation * sensitivity analysis * partial differential equation (PDE)
OECD category: Applied mathematics
Impact factor: 1.860, year: 2017
Permanent Link: http://hdl.handle.net/11104/0270797 - 3.0445719 - ÚI 2016 RIV NL eng J - Journal Article
Matonoha, Ctirad - Papáček, Š.
On the Connection and Equivalence of Two Methods for Solving an ill-posed Inverse Problem Based on FRAP Data.
Journal of Computational and Applied Mathematics. Roč. 290, 15 December (2015), s. 598-608. ISSN 0377-0427. E-ISSN 1879-1778
Grant - others:GA MŠk(CZ) ED2.1.00/01.0024; GA MŠk(CZ) LO1205
Institutional support: RVO:67985807
Keywords : inverse problem * parameter identification * Tikhonov regularization * least squares with a quadratic constraint * L-curve * FRAP
Subject RIV: BA - General Mathematics
Impact factor: 1.328, year: 2015
Permanent Link: http://hdl.handle.net/11104/0247781File Download Size Commentary Version Access 0445719.pdf 1 649.2 KB Author´s preprint require - 4.0435849 - MBÚ 2015 RIV US eng J - Journal Article
Kaňa, Radek - Kotabová, Eva - Lukeš, Martin - Papáček, Š. - Matonoha, Ctirad - Liu, L.N. - Prášil, Ondřej - Mullineaux, C.W.
Phycobilisome Mobility and Its Role in the Regulation of Light Harvesting in Red Algae.
Plant Physiology. Roč. 165, č. 4 (2014), s. 1618-1631. ISSN 0032-0889. E-ISSN 1532-2548
R&D Projects: GA ČR GAP501/12/0304; GA MŠMT ED2.1.00/03.0110
Institutional support: RVO:61388971 ; RVO:67985807
Keywords : EXCITATION-ENERGY TRANSFER * CYANOBACTERIAL THYLAKOID MEMBRANES * MICROALGA PORPHYRIDIUM-CRUENTUM
Subject RIV: EE - Microbiology, Virology; BA - General Mathematics (UIVT-O)
Impact factor: 6.841, year: 2014
Permanent Link: http://hdl.handle.net/11104/0239776 - 5.0376216 - ÚI 2013 RIV GB eng J - Journal Article
Papáček, Š. - Kaňa, Radek - Matonoha, Ctirad
Estimation of diffusivity of phycobilisomes on thylakoid membrane based on spatio-temporal FRAP images.
Mathematical and Computer Modelling. Roč. 57, 7-8 (2013), s. 1907-1912. ISSN 0895-7177
R&D Projects: GA ČR GP206/09/P094; GA ČR GA201/09/1957; GA MŠMT(CZ) ED2.1.00/03.0110
Grant - others:GA JU(CZ) 152/2010/Z
Institutional research plan: CEZ:AV0Z50200510; CEZ:AV0Z10300504
Keywords : parameter estimation * FRAP * boundary value problem * optimization
Subject RIV: BA - General Mathematics; EE - Microbiology, Virology (MBU-M)
Impact factor: 2.020, year: 2013
Permanent Link: http://hdl.handle.net/11104/0208678 - 6.0358693 - ÚI 2013 RIV NL eng J - Journal Article
Papáček, Š. - Matonoha, Ctirad - Štumbauer, V. - Štys, D.
Modelling and Simulation of Photosynthetic Microorganism Growth: Random Walk vs. Finite Difference Method.
Mathematics and Computers in Simulation. Roč. 82, č. 10 (2012), s. 2022-2032. ISSN 0378-4754. E-ISSN 1872-7166.
[Modelling 2009. IMACS Conference on Mathematical Modelling and Computational Methods in Applied Sciences and Engineering /4./. Rožnov pod Radhoštěm, 22.06.2009-26.06.2009]
Grant - others:CENAKVA(CZ) CZ.1.05/2.1.00/01.0024; GA JU(CZ) 152//2010/Z
Institutional research plan: CEZ:AV0Z10300504
Keywords : multiscale modelling * distributed parameter system * boundary value problem * random walk * photosynthetic factory
Subject RIV: EI - Biotechnology ; Bionics
Impact factor: 0.836, year: 2012
Permanent Link: http://hdl.handle.net/11104/0196652File Download Size Commentary Version Access 0358693.pdf 1 2 MB poster Other open-access - 7.0358503 - ÚI 2012 RIV GB eng J - Journal Article
Papáček, Š. - Štumbauer, V. - Štys, D. - Petera, K. - Matonoha, Ctirad
Growth Impact of Hydrodynamic Dispersion in a Couette-Taylor Bioreactor.
Mathematical and Computer Modelling. Roč. 54, 7-8 (2011), s. 1791-1795. ISSN 0895-7177
Institutional research plan: CEZ:AV0Z10300504
Keywords : multi-scale modelling * distributed parameter system * boundary value problem * random walk * photosynthetic factory
Subject RIV: EI - Biotechnology ; Bionics
Impact factor: 1.346, year: 2011
Permanent Link: http://hdl.handle.net/11104/0196527 - 8.0341543 - ÚTIA 2011 RIV NL eng J - Journal Article
Papáček, Š. - Čelikovský, Sergej - Rehák, Branislav - Štys, D.
Experimental design for parameter estimation of two time-scale model of photosynthesis and photoinhibition in microalgae.
Mathematics and Computers in Simulation. Roč. 80, č. 6 (2010), s. 1302-1309. ISSN 0378-4754. E-ISSN 1872-7166
R&D Projects: GA ČR(CZ) GA102/08/0186
Institutional research plan: CEZ:AV0Z10750506
Keywords : Photosynthetic factory * Experimental design * Parameter estimation * Two-scale modeling
Subject RIV: BC - Control Systems Theory
Impact factor: 0.812, year: 2010
http://library.utia.cas.cz/separaty/2010/TR/celikovsky-0341543.pdf
Permanent Link: http://hdl.handle.net/11104/0184487 - 9.0098949 - ÚTIA 2008 RIV US eng J - Journal Article
Rehák, Branislav - Čelikovský, Sergej - Papáček, Š.
Model for Photosynthesis and Photoinhibition: Parameter Identification Based on the Harmonic Irradiation 0_2 Response Measurement.
[Model fotosyntézy a fotoinhibice a jeho identifikace metodou harmonického buzení.]
IEEE Transactions on Automatic Control. Roč. 53, č. 1 (2008), s. 101-108. ISSN 0018-9286. E-ISSN 1558-2523
R&D Projects: GA ČR GA102/05/0011; GA ČR GP102/07/P413
Grant - others:GA ČR(CZ) GA102/05/0903
Institutional research plan: CEZ:AV0Z10750506
Keywords : Biological system modeling * identification * least-squares method * nonlinear systems
Subject RIV: BC - Control Systems Theory
Impact factor: 3.293, year: 2008
Permanent Link: http://hdl.handle.net/11104/0157739 - 10.0082739 - ÚTIA 2007 RIV CZ eng J - Journal Article
Papáček, Š. - Čelikovský, Sergej - Štys, D.
How to Deal with the Multi-Scale Dynamical Systems: A case Study-Model for Photosynthesis, Photoinhibition and Photoacclimation.
[Mnohaškálové dynamické systémy: Případová studie modelu fotosyntézy, fotoinhibice a fotoaklimace.]
Materials Structure in Chemistry, Biology, Physics and Technology. Roč. 14, č. 1 (2007), s. 43-43. ISSN 1211-5894
R&D Projects: GA ČR GA102/05/0011
Institutional research plan: CEZ:AV0Z10750506
Keywords : fast and slow dynamics * photosynthesis
Subject RIV: BC - Control Systems Theory
Permanent Link: http://hdl.handle.net/11104/0146218