Search results
- 1.0585931 - ÚOCHB 2025 RIV AT eng C - Conference Paper (international conference)
Kirjner, A. - Yim, J. - Samusevich, Raman - Bracha, S. - Jaakkola, T. - Barzilay, R. - Fiete, I.
Improving protein optimization with smoothed fitness landscapes.
ICLR 2024. The Twelfth International Conference on Learning Representations. Vienna: ICLR, 2024.
[ICLR 2024. International Conference on Learning Representations /12./. Vienna (AT), 07.05.2024-11.05.2024]
Research Infrastructure: e-INFRA CZ II - 90254
Institutional support: RVO:61388963
Keywords : protein design * discrete optimization * protein engineering * markov chain monte carlo * graph signal processing
OECD category: Other biological topics
https://openreview.net/forum?id=rxlF2Zv8x0
Permanent Link: https://hdl.handle.net/11104/0353566File Download Size Commentary Version Access 0585931.pdf 0 1.5 MB Publisher’s postprint open-access - 2.0577739 - BTÚ 2024 RIV eng P - Patent Document
Bařinka, Cyril - Pomper, M. - Nováková, Zora - Foss, C. A.
Development of new monoclonal antibodies recognizing human prostate-specific membrane antigen (PSMA).
2023. Owner: The Johns Hopkins University, Biotechnologický ústav AV ČR, v. v. i. Date of the patent acceptance: 03.10.2023. Patent Number: US11773182. Territorial Protection: mezinárodní patentová ochrana dle Smlouvy o patentové spolupráci.
Institutional support: RVO:86652036
Keywords : Prostate-specific membrane antigen * Anticalin * protein engineering
OECD category: Biochemistry and molecular biology
https://worldwide.espacenet.com/patent/search/family/062791260/publication/US11773182B2?q=US11773182
Permanent Link: https://hdl.handle.net/11104/0346854 - 3.0569555 - BTÚ 2023 RIV CH eng J - Journal Article
Lišková, Veronika - Kosztyu, P. - Kuchař, Milan - Černý, Jiří - Bharadwaj, Shiv - Petroková, Hana - Vroblova, E. - Křupka, M. - Malý, Michal - Zosincuková, Tereza - Sulc, Josef - Kafkova, L. R. - Raška, M. - Malý, Petr
Myomedin replicas of gp120 V3 loop glycan epitopes recognized by PGT121 and PGT126 antibodies as non-cognate antigens for stimulation of HIV-1 broadly neutralizing antibodies.
Frontiers in Immunology. Roč. 13, DEC 8 2022 (2022), č. článku 1066361. ISSN 1664-3224. E-ISSN 1664-3224
R&D Projects: GA MŠMT(CZ) EF16_025/0007397
Institutional support: RVO:86652036
Keywords : hiv-1 * glycoprotein 120 * protein scaffold * protein engineering * broadly neutralizing antibody * vaccine
OECD category: Immunology
Impact factor: 7.3, year: 2022
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fimmu.2022.1066361/full
Permanent Link: https://hdl.handle.net/11104/0341007 - 4.0563670 - BTÚ 2023 RIV eng P - Patent Document
Skerra, A. - Richter, A. - Völker, M. - Bařinka, Cyril - Ptáček, Jakub
NOVEL PSMA-SPECIFIC BINDING PROTEINS.
2022. Owner: Biotechnologický ústav AV ČR, v. v. i., Technische Universitaet Muenchen. Date of the patent acceptance: 11.10.2022. Patent Number: US 11464877
Institutional support: RVO:86652036
Keywords : Prostate-specific membrane antigen * Anticalin * protein engineering
OECD category: Biochemistry and molecular biology
https://worldwide.espacenet.com/patent/search/family/053540662/publication/WO2017005799A1?q=PCT%2FEP2016%2F065993
Permanent Link: https://hdl.handle.net/11104/0335559 - 5.0558832 - MBÚ 2023 RIV DE eng J - Journal Article
Mészáros, Zuzana - Petrásková, Lucie - Kulik, Natalia - Pelantová, Helena - Bojarová, Pavla - Křen, Vladimír - Slámová, Kristýna
Hypertransglycosylating Variants of the GH20 beta-N-Acetylhexosaminidase for the Synthesis of Chitooligomers.
Advanced Synthesis & Catalysis. Roč. 364, č. 12 (2022), s. 2009-2022. ISSN 1615-4150. E-ISSN 1615-4169
R&D Projects: GA ČR(CZ) GA20-00477S; GA MŠMT(CZ) LTC19035; GA MŠMT(CZ) LM2018131
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:61388971
Keywords : chitinase * protein * expression * tryptophan * mutants * yasara * biotransformations * enzymes * glycosylation * oligosaccharides * protein engineering * protein models
OECD category: Biochemistry and molecular biology
Impact factor: 5.4, year: 2022
Method of publishing: Limited access
https://onlinelibrary.wiley.com/doi/epdf/10.1002/adsc.202200046
Permanent Link: https://hdl.handle.net/11104/0332423 - 6.0557143 - BTÚ 2022 RIV eng P - Patent Document
Skerra, A. - Richter, A. - Morath, V. - Bařinka, Cyril - Ptáček, Jakub
NOVEL PSMA-SPECIFIC BINDING PROTEINS.
2021. Owner: Technische Universitaet Muenchen, Biotechnologický ústav AV ČR, v. v. i. Date of the patent acceptance: 14.04.2021. Patent Number: EP 3319641
Institutional support: RVO:86652036
Keywords : Prostate-specific membrane antigen * Anticalin * Protein engineering
OECD category: Biochemistry and molecular biology
https://worldwide.espacenet.com/patent/search/family/053540662/publication/EP3319641B1?q=pn%3DEP3319641B1
Permanent Link: http://hdl.handle.net/11104/0331197 - 7.0556399 - ÚOCHB 2023 RIV DE eng J - Journal Article
Tobola, F. - Lepšík, Martin - Zia, S. R. - Leffler, H. - Nilsson, U. J. - Blixt, O. - Imberty, A. - Wiltschi, B.
Engineering the Ligand Specificity of the Human Galectin-1 by Incorporation of Tryptophan Analogues.
Chembiochem. Roč. 23, č. 5 (2022), č. článku e202100593. ISSN 1439-4227. E-ISSN 1439-7633
Institutional support: RVO:61388963
Keywords : lectins * molecular dynamic * non-canonical amino acids * protein engineering * synthetic glycobiolog
OECD category: Biochemistry and molecular biology
Impact factor: 3.2, year: 2022
Method of publishing: Limited access
https://doi.org/10.1002/cbic.202100593
Permanent Link: http://hdl.handle.net/11104/0331096 - 8.0542184 - BTÚ 2022 RIV CH eng J - Journal Article
Pham, Phuong Ngoc - Huličiak, Maroš - Biedermannová, Lada - Černý, Jiří - Charnavets, Tatsiana - Fuertes, Gustavo - Herynek, Štěpán - Kolářová, Lucie - Kolenko, Petr - Pavlíček, Jiří - Zahradník, Jiří - Mikulecký, Pavel - Schneider, Bohdan
Protein Binder (ProBi) as a New Class of Structurally Robust Non-Antibody Protein Scaffold for Directed Evolution.
Viruses. Roč. 13, č. 2 (2021), č. článku 190. E-ISSN 1999-4915
R&D Projects: GA ČR(CZ) GA16-20507S; GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) LM2018127
Institutional support: RVO:86652036
Keywords : directed evolution * protein scaffold * protein engineering * computational saturation * ribosome display * interleukin-10
OECD category: Virology
Impact factor: 5.818, year: 2021
Method of publishing: Open access
https://www.mdpi.com/1999-4915/13/2/190
Permanent Link: http://hdl.handle.net/11104/0319662 - 9.0525109 - ÚOCHB 2021 RIV SE eng J - Journal Article
Buček, Aleš - Vazdar, M. - Tupec, Michal - Svatoš, Aleš - Pichová, Iva
Desaturase specificity is controlled by the physicochemical properties of a single amino acid residue in the substrate binding tunnel.
Computational and Structural Biotechnology Journal. Roč. 18, May (2020), s. 1202-1209. ISSN 2001-0370. E-ISSN 2001-0370
R&D Projects: GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388963
Keywords : acyl-CoA desaturase * Manduca sexta * Bombyx mori * enzymatic specificity * protein engineering * molecular dynamics simulations
OECD category: Biochemistry and molecular biology
Impact factor: 7.271, year: 2020
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S2001037020302749?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0309320 - 10.0522243 - BTÚ 2020 RIV eng P - Patent Document
Skerra, A. - Richter, A. - Morath, V. - Bařinka, Cyril - Ptáček, Jakub
PSMA-Specific Binding Proteins.
2019. Owner: Biotechnologický ústav AV ČR, v. v. i. Technische Universitaet Muenchen. Date of the patent acceptance: 10.09.2019. Patent Number: US10406247
Institutional support: RVO:86652036
Keywords : Prostate-specific membrane antigen * Anticalin * protein engineering
OECD category: Biochemistry and molecular biology
https://worldwide.espacenet.com/patent/search/family/053540662/publication/US10406247B2?q=US%2010406247
Permanent Link: http://hdl.handle.net/11104/0306770