Search results
- 1.0539333 - BFÚ 2021 RIV CH eng J - Journal Article
Bartas, M. - Brázda, Václav - Bohalova, Natalia - Cantara, Alessio - Volna, A. - Stachurová, T. - Malachová, K. - Jagelská, Eva - Porubiakova, Otilia - Cerven, J. - Pečinka, P.
In-Depth Bioinformatic Analyses ofNidoviralesIncluding Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles.
Frontiers in Microbiology. Roč. 11, jul 3 2020 (2020), č. článku 1583. ISSN 1664-302X. E-ISSN 1664-302X
Institutional support: RVO:68081707
Keywords : g-quadruplex structures * web-based server * molecular-biology * rna * dna
OECD category: Microbiology
Impact factor: 5.640, year: 2020
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fmicb.2020.01583/full
Permanent Link: http://hdl.handle.net/11104/0317023 - 2.0523977 - BFÚ 2021 RIV US eng J - Journal Article
Cutova, M. - Manta, J. - Porubiakova, O. - Kaura, P. - Šťastný, J. - Jagelská, Eva - Goswami, Pratik - Bartas, M. - Brázda, Václav
Divergent distributions of inverted repeats and G-quadruplex forming sequences in Saccharomyces cerevisiae.
Genomics. Roč. 112, č. 2 (2020), s. 1897-1901. ISSN 0888-7543. E-ISSN 1089-8646
R&D Projects: GA ČR(CZ) GA18-15548S
Institutional support: RVO:68081707
Keywords : web-based server * nucleic-acids * dna * binding * transcription
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 5.736, year: 2020
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0888754319305269?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0308301 - 3.0492335 - BFÚ 2019 RIV US eng J - Journal Article
Čechová, Jana - Coufal, Jan - Jagelská, Eva - Fojta, Miroslav - Brázda, Václav
p73, like its p53 homolog, shows preference for inverted repeats forming cruciforms.
PLoS ONE. Roč. 13, č. 4 (2018), č. článku e0195835. ISSN 1932-6203. E-ISSN 1932-6203
R&D Projects: GA ČR GA15-21855S; GA MŠMT EF15_003/0000477
Institutional support: RVO:68081707
Keywords : sequence-specific binding * dna-binding * transcriptional activity * supercoiled dna
OECD category: Biochemistry and molecular biology
Impact factor: 2.776, year: 2018
Permanent Link: http://hdl.handle.net/11104/0285848 - 4.0485751 - BFÚ 2018 RIV US eng J - Journal Article
Brázda, Václav - Čechová, Jana - Battistin, M. - Coufal, Jan - Jagelská, Eva - Raimondi, I. - Inga, A.
The structure formed by inverted repeats in p53 response elements determines the transactivation activity of p53 protein.
Biochemical and Biophysical Research Communications. Roč. 483, č. 1 (2017), s. 516-521. ISSN 0006-291X. E-ISSN 1090-2104
R&D Projects: GA ČR GA15-21855S
Institutional support: RVO:68081707
Keywords : tumor-suppressor p53 * cruciform structures * dna-conformation
OECD category: Biochemistry and molecular biology
Impact factor: 2.559, year: 2017
Permanent Link: http://hdl.handle.net/11104/0280695 - 5.0471968 - BFÚ 2017 RIV GB eng J - Journal Article
Brázda, Václav - Haroniková, Lucia - Liao, J.C.C. - Fridrichova, Helena - Jagelská, Eva
Strong preference of BRCA1 protein to topologically constrained non-B DNA structures.
B M C Molecular Biology. Roč. 17, JAN2016 (2016), č. článku 14. ISSN 1471-2199. E-ISSN 1471-2199
R&D Projects: GA ČR GA15-21855S
Institutional support: RVO:68081707
Keywords : double-strand breaks * g-quadruplexes * c-myc
Subject RIV: BO - Biophysics
Impact factor: 1.939, year: 2016
Permanent Link: http://hdl.handle.net/11104/0269328 - 6.0462078 - BFÚ 2017 RIV US eng J - Journal Article
Haroniková, Lucia - Coufal, Jan - Kejnovská, Iva - Jagelská, Eva - Fojta, Miroslav - Dvořáková, P. - Muller, P. - Vojtešek, B. - Brázda, Václav
IFI16 Preferentially Binds to DNA with Quadruplex Structure and Enhances DNA Quadruplex Formation.
PLoS ONE. Roč. 11, č. 6 (2016). ISSN 1932-6203. E-ISSN 1932-6203
R&D Projects: GA ČR GA15-21855S; GA ČR(CZ) GBP206/12/G151
Institutional support: RVO:68081707
Keywords : INTERFERON-INDUCIBLE PROTEIN * CIRCULAR-DICHROISM SPECTROSCOPY * RELEVANT G-QUADRUPLEX
Subject RIV: BO - Biophysics
Impact factor: 2.806, year: 2016
Permanent Link: http://hdl.handle.net/11104/0261610 - 7.0422257 - BFÚ 2014 RIV US eng J - Journal Article
Coufal, Jan - Jagelská, Eva - Liao, J.C.C. - Brázda, Václav
Preferential binding of p53 tumor suppressor to p21 promoter sites that contain inverted repeats capable of forming cruciform structure.
Biochemical and Biophysical Research Communications. Roč. 441, č. 1 (2013), s. 83-85. ISSN 0006-291X. E-ISSN 1090-2104
R&D Projects: GA ČR(CZ) GAP301/11/2076; GA ČR(CZ) GBP206/12/G151
Institutional research plan: CEZ:AV0Z50040702
Institutional support: RVO:68081707
Keywords : DNA-BINDING * SUPERCOILED DNA * EXPRESSION
Subject RIV: BO - Biophysics
Impact factor: 2.281, year: 2013
Permanent Link: http://hdl.handle.net/11104/0228458 - 8.0389526 - BFÚ 2013 US eng J - Journal Article
Brázda, Václav - Čechová, J. - Coufal, Jan - Rumpel, S. - Jagelská, Eva
Superhelical DNA as a preferential binding target of 14-3-3 gamma protein.
[Superhelical DNA as a preferential binding target of 14-3-3 gamma protein.]
Journal of Biomolecular Structure & Dynamics. Roč. 30, č. 4 (2012), s. 371-378. ISSN 0739-1102
R&D Projects: GA ČR(CZ) 301/10/1211; GA MŠMT(CZ) LC 06035; GA AV ČR(CZ) M200040904
Institutional support: RVO:68081707
Keywords : TUMOR-SUPPRESSOR P53 * ASSOCIATES IN-VIVO * SUPERCOILED DNA
Subject RIV: BO - Biophysics
Impact factor: 4.986, year: 2010
Permanent Link: http://hdl.handle.net/11104/0218405 - 9.0365821 - BFÚ 2012 RIV GB eng J - Journal Article
Brázda, Václav - Laister, R.C. - Jagelská, Eva - Arrowsmith, Ch.
Cruciform structures are a common DNA feature important for regulating biological processes.
B M C Molecular Biology. Roč. 12, č. 33 (2011), s. 1-16. ISSN 1471-2199. E-ISSN 1471-2199
R&D Projects: GA ČR(CZ) GAP301/10/1211; GA MŠMT(CZ) LC06035
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : cruciform structure * inverted repeat * protein-DNA binding
Subject RIV: BO - Biophysics
Impact factor: 2.857, year: 2011
Permanent Link: http://hdl.handle.net/11104/0200975 - 10.0342523 - BFÚ 2011 RIV NL eng J - Journal Article
Pivoňková, Hana - Šebest, Peter - Pečinka, P. - Tichá, Olga - Němcová, Kateřina - Brázdová, Marie - Brázdová Jagelská, Eva - Brázda, Václav - Fojta, Miroslav
Selective binding of tumor suppressor p53 protein to topologically constrained DNA: Modulation by intercalative drugs.
Biochemical and Biophysical Research Communications. Roč. 393, č. 4 (2010), s. 894-899. ISSN 0006-291X. E-ISSN 1090-2104
R&D Projects: GA AV ČR(CZ) IAA500040701; GA ČR(CZ) GP204/07/P476; GA ČR(CZ) GP301/07/P160; GA AV ČR(CZ) 1QS500040581; GA MŠMT(CZ) LC06035; GA ČR(CZ) GA204/08/1560
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : p53-DNA binding * supercoiled DNA * DNA topology
Subject RIV: BO - Biophysics
Impact factor: 2.595, year: 2010
Permanent Link: http://hdl.handle.net/11104/0185238