Search results
- 1.0574529 - BTÚ 2024 RIV GB eng J - Journal Article
Svoboda, Jakub - Berdár, Daniel - Kolenko, Petr - Černý, Jiří - Nováková, Zora - Pavlíček, Jiří - Schneider, Bohdan
Conformation-based refinement of 18-mer DNA structures.
Acta Crystallographica Section D-Biological Crystallography. Roč. 79, JUL 2023 (2023), s. 655-665. ISSN 1399-0047. E-ISSN 2059-7983
R&D Projects: GA MŠMT(CZ) LTAUSA18197; GA MŠMT EF16_019/0000778
Institutional support: RVO:86652036
Keywords : DNA structure * dnatco.datmos.org * structure validation * structure refinement * base pairing
OECD category: Biochemistry and molecular biology
Impact factor: 2.2, year: 2022
Method of publishing: Open access
https://scripts.iucr.org/cgi-bin/paper?S2059798323004679
Permanent Link: https://hdl.handle.net/11104/0345411 - 2.0554216 - BTÚ 2022 RIV CZ eng L4 - Software
Malý, Martin - Diederichs, K. - Dohnálek, Jan - Kolenko, Petr
PAIREF.
Internal code: v1.2.8 ; 2021
Technical parameters: PAIREF is a Python-based program for the Computational Crystallography Toolbox available for Windows, GNU/Linux and MacOS. Graphical and command-line interfaces are provided. For structure model refinement, PAIREF supports REFMAC5 (part of the CCP4 Software Suite) and phenix.refine (part of the Phenix package). This work is co-developed with the Czech Technical University in Prague, Faculty of Nuclear Sciences and Physical Engineering, Břehová 7, Prague, IČ: 68407700
Economic parameters: This project was funded by the MEYS CR (projects CAAS – CZ.02.1.01/0.0/0.0/16_019/0000778, BIOCEV – CZ.1.05/1.1.00/02.0109, and ELIBIO – CZ.02.1.01/0.0/0.0/15_003/0000447) from the ERDF fund, by the Czech science foundation (project 18-10687S), by the Czech Academy of Sciences (project 86652036), and by the GA CTU in Prague (SGS19/189/OHK4/3T/14). This work is co-developed with the Czech Technical University in Prague, Faculty of Nuclear Sciences and Physical Engineering, Břehová 7, Prague, IČ: 68407700
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT EF15_003/0000447; GA ČR(CZ) GA18-10687S
Institutional support: RVO:86652036
Keywords : X-ray diffraction * structure refinement * data resolution
OECD category: Biochemistry and molecular biology
https://pairef.fjfi.cvut.cz/
Permanent Link: http://hdl.handle.net/11104/0328837
Research data: Zenodo - 3.0519590 - FZÚ 2020 RIV DE eng J - Journal Article
Smeets, S. - Zones, S. I. - Xie, D. - Palatinus, Lukáš - Pascual, J. - Hwang, S.-J. - Schmidt, J.E. - McCusker, L.B.
SSZ-27: A small-ore zeolite with large heart-shaped cavities determined by using multi-crystal electron diffraction.
Angewandte Chemie - International Edition. Roč. 58, č. 37 (2019), s. 13080-13086. ISSN 1433-7851. E-ISSN 1521-3773
Institutional support: RVO:68378271
Keywords : multicrystal electron diffraction * structure refinement * zeolites * SSZ-27 * hierarchical cluster analysis * heart shaped cavity
OECD category: Condensed matter physics (including formerly solid state physics, supercond.)
Impact factor: 12.959, year: 2019
Method of publishing: Open access
Permanent Link: http://hdl.handle.net/11104/0304579File Download Size Commentary Version Access 0519590.pdf 0 3.8 MB CC Licence Publisher’s postprint open-access - 4.0501617 - FZÚ 2019 RIV GB eng J - Journal Article
Wiedorn, M.O. - Oberthuer, D. - Bean, R. - Andreasson, Jakob - Hajdu, Janos … Total 126 authors
Megahertz serial crystallography.
Nature Communications. Roč. 9, Oct (2018), s. 1-11, č. článku 4025. E-ISSN 2041-1723
R&D Projects: GA MŠMT EF16_019/0000789; GA MŠMT EF15_003/0000447
Grant - others:OP VVV - ADONIS(XE) CZ.02.1.01/0.0/0.0/16_019/0000789; OP VVV - ELIBIO(XE) CZ.02.1.01/0.0/0.0/15_003/0000447
Institutional support: RVO:68378271
Keywords : Free-Electron Laser * X-ray laser * m beta-lactamases * structure refinement * diffraction data * protein * radiation * software * pulses * PHENIX
OECD category: Fluids and plasma physics (including surface physics)
Impact factor: 11.878, year: 2018
Permanent Link: http://hdl.handle.net/11104/0293607File Download Size Commentary Version Access 0501617.pdf 0 3.8 MB CC licence Publisher’s postprint open-access - 5.0467727 - FZÚ 2017 RIV US eng J - Journal Article
Steciuk, G. - Boullay, P. - Pautrat, A. - Barrier, N. - Caignaert, V. - Palatinus, Lukáš
Unusual relaxor ferroelectric behavior in stairlike aurivillius phases.
Inorganic Chemistry. Roč. 55, č. 17 (2016), s. 8881-8891. ISSN 0020-1669. E-ISSN 1520-510X
Institutional support: RVO:68378271
Keywords : electron-diffraction tomography * crystal structure * structure refinement * modulated structure
Subject RIV: BM - Solid Matter Physics ; Magnetism
Impact factor: 4.857, year: 2016
Permanent Link: http://hdl.handle.net/11104/0265768 - 6.0459031 - FZÚ 2017 RIV DE eng J - Journal Article
Majzlan, J. - Plášil, Jakub - Dachs, E. - Benisek, A. - Bender Koch, CH.
Crystal chemistry, Mössbauer spectroscopy, and thermodynamic properties of botryogen.
Neues Jahrbuch für Mineralogie. Abhandlungen. Roč. 193, č. 2 (2016), s. 147-159. ISSN 0077-7757. E-ISSN 0077-7757
R&D Projects: GA MŠMT LO1603
Grant - others:EU(XE) CZ.2.16/3.1.00/24510
Institutional support: RVO:68378271
Keywords : botryogen * crystal-structure refinement * H atoms * Mössbauer spectroscopy * thermodynamics * acid-mine drainage
Subject RIV: DB - Geology ; Mineralogy
Impact factor: 0.811, year: 2016
Permanent Link: http://hdl.handle.net/11104/0259235 - 7.0452352 - FZÚ 2016 RIV GB eng J - Journal Article
Palatinus, Lukáš - Correa, Cinthia Antunes - Steciuk, G. - Jacob, D. - Roussel, P. - Boullay, P. - Klementová, Mariana - Gemmi, M. - Kopeček, Jaromír - Domeneghetti, C. - Cámara, F. - Petříček, Václav
Structure refinement using precession electron diffraction tomography and dynamical diffraction: tests on experimental data.
Acta Crystallographica Section B-Structural Science Crystal Engineering and Materials. Roč. 71, č. 6 (2015), 740-751. E-ISSN 2052-5206
R&D Projects: GA MŠMT(CZ) LM2011029; GA ČR GA13-25747S; GA MŠMT LO1409
Grant - others:SAFMAT(XE) CZ.2.16/3.1.00/22132; FUNBIO(XE) CZ.2.16/3.1.00/21568
Keywords : XRD * structure refinement * precession electron diffraction
Subject RIV: BM - Solid Matter Physics ; Magnetism
Impact factor: 2.892, year: 2015
Permanent Link: http://hdl.handle.net/11104/0253352 - 8.0433582 - ÚJF 2015 RIV GB eng J - Journal Article
Gebresenbut, G. - Andersson, M. S. - Beran, Přemysl - Manuel, P. - Nordblad, P. - Sahlberg, M. - Gomez, C. P.
Long range ordered magnetic and atomic structures of the quasicrystal approximant in the Tb-Au-Si system.
Journal of Physics-Condensed Matter. Roč. 26, č. 32 (2014), s. 322202. ISSN 0953-8984. E-ISSN 1361-648X
R&D Projects: GA MŠMT(XE) LM2011019
EU Projects: European Commission(XE) 283883 - NMI3-II
Institutional support: RVO:61389005
Keywords : magnetic property * magnetic structure refinement * approximants of quasicrystals
Subject RIV: BM - Solid Matter Physics ; Magnetism
Impact factor: 2.346, year: 2014
Permanent Link: http://hdl.handle.net/11104/0237813 - 9.0425080 - FZÚ 2014 RIV US eng J - Journal Article
Jacob, D. - Palatinus, Lukáš - Cuvillier, P. - Leroux, H. - Domeneghetti, C. - Cámara, F.
Ordering state in orthopyroxene as determined by precession electron diffraction.
American Mineralogist. Roč. 98, 8-9 (2013), s. 1526-1534. ISSN 0003-004X. E-ISSN 1945-3027
Institutional support: RVO:68378271
Keywords : orthopyroxene * precession electron diffraction * structure refinement * transmission electron microscopy
Subject RIV: DB - Geology ; Mineralogy
Impact factor: 2.059, year: 2013
Permanent Link: http://hdl.handle.net/11104/0231016 - 10.0421109 - FZÚ 2014 RIV GB eng J - Journal Article
Friese, K. - Grzechnik, A. - Posse, J.M. - Petříček, Václav
Refinement of high pressure single-crystal diffraction data using Jana2006.
High Pressure Research. Roč. 33, č. 1 (2013), s. 196-201. ISSN 0895-7959. E-ISSN 1477-2299
Institutional support: RVO:68378271
Keywords : high pressure single-crystal diffraction * structure refinement * Jana2006
Subject RIV: BM - Solid Matter Physics ; Magnetism
Impact factor: 0.926, year: 2013
Permanent Link: http://hdl.handle.net/11104/0227530