Search results
- 1.0565888 - FZÚ 2023 RIV GB eng J - Journal Article
Zabelskii, D. - Dmitrieva, N. - Volkov, O. - Shevchenko, V. - Kovalev, K. - Balandin, T. - Soloviov, D. V. - Astashkin, A. - Zinovev, E. - Alekseev, A. - Round, E. - Polovinkin, Vitaly - Chizhov, I. - Rogachev, A. - Okhrimenko, I. - Borshchevskiy, V. - Chupin, V. - Buldt, G. - Yutin, N. - Bamberg, E. - Koonin, E. - Gordeliy, V.
Structure-based insights into evolution of rhodopsins.
Communications Biology. Roč. 4, č. 1 (2021), č. článku 821. E-ISSN 2399-3642
Institutional support: RVO:68378271
Keywords : driven proton pump * lipidic cubic phases * sensory rhodopsin * crystallographic structure
OECD category: Particles and field physics
Impact factor: 6.548, year: 2021
Method of publishing: Open access
Permanent Link: https://hdl.handle.net/11104/0337367File Download Size Commentary Version Access 0565888.pdf 0 6.4 MB CC licence Publisher’s postprint open-access
Research data: Protein Data Bank - 2.0555515 - BC 2023 RIV GB eng J - Journal Article
Kindler, G.S. - Wong, Hon Lun - Larkum, A. W. D. - Johnson, M. - MacLeod, F.I. - Burns, B.P.
Genome-resolved metagenomics provides insights into the functional complexity of microbial mats in Blue Holes, Shark Bay.
FEMS Microbiology Ecology. Roč. 98, č. 1 (2022), č. článku fiab158. ISSN 0168-6496. E-ISSN 1574-6941
Institutional support: RVO:60077344
Keywords : evolutionary implications * diversity * alignment * protein * rhodopsin * microbial mats * Shark Bay * metagenomics
OECD category: Microbiology
Impact factor: 4.2, year: 2022
Method of publishing: Limited access
https://doi.org/10.1093/femsec/fiab158
Permanent Link: https://hdl.handle.net/11104/0340847 - 3.0542935 - MBÚ 2022 RIV CH eng J - Journal Article
Kopejtka, Karel - Zeng, Yonghui - Kaftan, David - Selyanin, Vadim - Gardian, Zdenko - Tomasch, J. - Sommaruga, R. - Koblížek, Michal
Characterization of the Aerobic Anoxygenic Phototrophic Bacterium Sphingomonas sp. AAP5.
Microorganisms. Roč. 9, č. 4 (2021), č. článku 768. E-ISSN 2076-2607
R&D Projects: GA ČR(CZ) GJ18-14095Y
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : aerobic anoxygenic phototrophic bacteria * bacteriochlorophyll a * photosynthesis genes * rhodopsin * Sphingomonadaceae
OECD category: Microbiology; Microbiology (BC-A)
Impact factor: 4.926, year: 2021
Method of publishing: Open access
https://www.mdpi.com/2076-2607/9/4/768
Permanent Link: http://hdl.handle.net/11104/0320259 - 4.0536958 - MBÚ 2021 RIV GB eng J - Journal Article
Kopejtka, Karel - Tomasch, J. - Zeng, Yonghui - Selyanin, Vadim - Dachev, Marko - Piwosz, Kasia - Tichý, Martin - Bína, David - Gardian, Zdenko - Bunk, B. - Brinkmann, H. - Geffers, R. - Sommaruga, R. - Koblížek, Michal
Simultaneous presence of bacteriochlorophyll and xanthorhodopsin genes in a freshwater bacterium.
mSystems. Roč. 5, č. 6 (2020), č. článku e01044-20. ISSN 2379-5077. E-ISSN 2379-5077
R&D Projects: GA ČR(CZ) GJ18-14095Y
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : Aerobic anoxygenic phototrophic bacteria * Bacteriochlorophyll * Gene expression * Photosynthesis gene cluster * Rhodopsin
OECD category: Microbiology; Biochemistry and molecular biology (BC-A)
Impact factor: 6.496, year: 2020
Method of publishing: Open access
https://msystems.asm.org/content/5/6/e01044-20
Permanent Link: http://hdl.handle.net/11104/0314709 - 5.0522223 - FZÚ 2020 RIV US eng J - Journal Article
Hontani, Y. - Ganapathy, S. - Frehan, S. - Kloz, Miroslav - de Grip, W.J. - Kennis, J.T.M.
Strong pH-dependent near-infrared fluorescence in a microbial rhodopsin reconstituted with a red-shifting retinal analogue.
Journal of Physical Chemistry Letters. Roč. 9, č. 22 (2018), s. 6469-6474. ISSN 1948-7185
R&D Projects: GA MŠMT EF15_003/0000449
Grant - others:OP VVV - HiFi(XE) CZ.02.1.01/0.0/0.0/15_003/0000449
Institutional support: RVO:68378271
Keywords : photochemical-reaction cycle * ion-pump rhodopsin * resonance Raman * all-trans * vibrational analysis * femtosecond * chromophore * dynamics * spectroscopy
OECD category: Fluids and plasma physics (including surface physics)
Impact factor: 7.329, year: 2018
Method of publishing: Open access
Permanent Link: http://hdl.handle.net/11104/0306741File Download Size Commentary Version Access 0522223.pdf 5 1.6 MB CC licence Publisher’s postprint open-access - 6.0481807 - BC 2018 RIV CH eng J - Journal Article
Cabello-Yeves, P.J. - Ghai, Rohit - Mehrshad, Maliheh - Picazo, A. - Camacho, A. - Rodriguez-Valera, F.
Reconstruction of diverse verrucomicrobial genomes from metagenome datasets of freshwater reservoirs.
Frontiers in Microbiology. Roč. 8, Nov (2017), č. článku 2131. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA ČR GA17-04828S
Grant - others:AV ČR(CZ) L200961651
Program: Program podpory perspektivních lidských zdrojů
Institutional support: RVO:60077344
Keywords : freshwater Verrucomicrobia * metagenomics * rhodopsin * nitrogen fixation * genome streamlining
OECD category: Microbiology
Impact factor: 4.019, year: 2017
Permanent Link: http://hdl.handle.net/11104/0277284 - 7.0480044 - BC 2018 RIV US eng J - Journal Article
Shevchenko, V. - Mager, T. - Kovalev, K. - Polovinkin, V. - Alekseev, A. - Juettner, J. - Chizhov, I. - Bamann, C. - Vavourakis, C. - Ghai, Rohit - Gushchin, I. - Borshchevskiy, V. - Rogachev, A. - Melnikov, I. - Popov, A. - Balandin, T. - Rodriguez-Valera, F. - Manstein, D. J. - Bueldt, G. - Bamberg, E. - Gordeliy, V.
Inward H+ pump xenorhodopsin: Mechanism and alternative optogenetic approach.
Science Advances. Roč. 3, č. 9 (2017), č. článku e1603187. ISSN 2375-2548. E-ISSN 2375-2548
R&D Projects: GA ČR(CZ) GA17-04828S
Institutional support: RVO:60077344
Keywords : sensory rhodopsin * membrane-proteins * purple membrane * proton pump
OECD category: Microbiology
Impact factor: 11.511, year: 2017
Permanent Link: http://hdl.handle.net/11104/0275964 - 8.0459767 - BC 2017 RIV CH eng J - Journal Article
Vavourakis, C. D. - Ghai, Rohit - Rodriguez-Valera, F. - Sorokin, D. Y. - Tringe, S. G. - Hugenholtz, P. - Muyzer, G.
Metagenomic insights into the uncultured diversity and physiology of microbes in four hypersaline soda lake brines.
Frontiers in Microbiology. Roč. 7, February (2016), č. článku 211. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA ČR(CZ) GA13-00243S
Institutional support: RVO:60077344
Keywords : soda lake brines * Nanohaloarchaea * Halobacteria * Bacteroidetes * hydrolytics * cellulase * chitinase * rhodopsin
Subject RIV: EE - Microbiology, Virology
Impact factor: 4.076, year: 2016
Permanent Link: http://hdl.handle.net/11104/0259960 - 9.0390649 - BC 2013 RIV US eng J - Journal Article
Szular, J. - Sehadová, Hana - Gentile, C. - Szabo, G. - Chou, W.-H. - Britt, S. G. - Stanewsky, R.
Rhodpsin 5- and Rhodopsin 6-mediated clock synchronization in Drosophila melanogaster in independent of retinal phospholipase C-beta signaling.
Journal of Biological Rhythms. Roč. 27, č. 1 (2012), s. 25-36. ISSN 0748-7304. E-ISSN 1552-4531
Institutional support: RVO:60077344
Keywords : Rhodopsin 5 * Rhodopsin 6 * phospholipase
Subject RIV: ED - Physiology
Impact factor: 3.229, year: 2012
Permanent Link: http://hdl.handle.net/11104/0219705