Search results
- 1.0457403 - BTÚ 2016 RIV GB eng J - Journal Article
Biedermannová, Lada - Schneider, Bohdan
Structure of the ordered hydration of amino acids in proteins: analysis of crystal structures.
Acta Crystallographica Section D-Biological Crystallography. Roč. 71, č. 11 (2015), s. 2178-2202. ISSN 1399-0047. E-ISSN 2059-7983
Institutional support: RVO:86652036
Keywords : protein hydration * structural biology * X-ray crystallography
OECD category: Biochemistry and molecular biology
Impact factor: 2.512, year: 2015
Method of publishing: Open access
http://journals.iucr.org/d/issues/2015/11/00/dw5143/index.html
Permanent Link: http://hdl.handle.net/11104/0257805 - 2.0452202 - BTÚ 2016 RIV CZ eng L4 - Software
Černý, Jiří - Biedermannová, Lada - Schneider, Bohdan
Atlas of Protein Hydration.
Internal code: webatlas_hydratace ; 2014
Technical parameters: website, html, css, javascript, JSmol applet
Economic parameters: typový projekt
R&D Projects: GA ČR(CZ) GPP205/12/P729; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:86652036
Keywords : protein hydration * structural biology * X-ray crystallography * Interaction energy * quantum chemistry
Subject RIV: BO - Biophysics
http://www.dnatco.org/atlas
Permanent Link: http://hdl.handle.net/11104/0253227 - 3.0451990 - BTÚ 2016 CZ eng O - Others
Biedermannová, Lada - Schneider, Bohdan
Hydration of amino acid residues in proteins: what can we learn from data mining?
2014
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA ČR GPP205/12/P729
Institutional research plan: CEZ:AV0Z50520701
Institutional support: RVO:86652036
Keywords : protein hydration * structural biology * X-ray crystallography
Subject RIV: CE - Biochemistry
Permanent Link: http://hdl.handle.net/11104/0253049 - 4.0451955 - BTÚ 2016 RIV CZ eng L4 - Software
Biedermannová, Lada
Calculation of hydration sites of amino-acid conformers.
Internal code: refine.sh ; 2014
Technical parameters: BASH script, licence GPL 3
Economic parameters: typový projekt
R&D Projects: GA ČR(CZ) GPP205/12/P729; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional research plan: CEZ:AV0Z50520701
Institutional support: RVO:86652036
Keywords : protein hydration * structural biology * X-ray crystallography * hydration sites * density representation method
Subject RIV: BO - Biophysics
http://www.dnatco.org/atlas/refine/
Permanent Link: http://hdl.handle.net/11104/0253011 - 5.0451604 - BTÚ 2016 RIV CZ eng L4 - Software
Biedermannová, Lada
Calculation of clusters of hydrated amino-acid conformers.
Internal code: cluster.sh ; 2014
Technical parameters: BASH script, licence GPL 3
Economic parameters: typový projekt
R&D Projects: GA ČR(CZ) GPP205/12/P729; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional research plan: CEZ:AV0Z50520701
Institutional support: RVO:86652036
Keywords : protein hydration * structural biology * X-ray crystallography, data mining * conformational clustering
Subject RIV: BO - Biophysics
http://www.dnatco.org/atlas/cluster/
Permanent Link: http://hdl.handle.net/11104/0252788 - 6.0396329 - ÚOCHB 2014 RIV GB eng J - Journal Article
Kysilka, Jiří - Vondrášek, Jiří
A systematic method for analysing the protein hydration structure of T4 lysozyme.
Journal of Molecular Recognition. Roč. 26, č. 10 (2013), s. 479-487. ISSN 0952-3499. E-ISSN 1099-1352
R&D Projects: GA ČR GAP208/10/0725; GA MŠMT(CZ) LH11020
Grant - others:GA ČR(CZ) GAP302/10/0427
Institutional support: RVO:61388963
Keywords : protein hydration structure * water * X-ray crystallography * cluster algorithm * interaction enthalpy
Subject RIV: CE - Biochemistry
Impact factor: 2.337, year: 2013
Permanent Link: http://hdl.handle.net/11104/0224147