Search results
- 1.0586305 - BC 2024 RIV GB eng J - Journal Article
Záhonová, Kristýna - Füssy, Z. - Stairs, C.W. - Leger, M.M. - Tachezy, J. - Čepička, I. - Roger, A.J. - Hampl, V.
Comparative analysis of mitochondrion- related organelles in anaerobic amoebozoans.
Microbial Genomics. Roč. 9, č. 11 (2023), č. článku 001143. ISSN 2057-5858. E-ISSN 2057-5858
R&D Projects: GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344
Keywords : glycine cleavage system * molecular evidence * reaction-mechanism * carrier family * l-threonine * protein * archamoebae * entamoeba * evolution * diversity * reductive evolution * mitochondrion-related organelles * anaerobiosis * comparative genomics
OECD category: Microbiology
Impact factor: 3.9, year: 2022
Method of publishing: Open access
https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.001143
Permanent Link: https://hdl.handle.net/11104/0353858 - 2.0586290 - ÚIACH 2025 RIV eng J - Journal Article
Bobálová, Janette - Strouhalová, Dana
Non‑enzymatic glycation: an essential modification of barley proteins affecting beer quality-brief review.
Cereal Research Communications. May (2024). ISSN 0133-3720. E-ISSN 1788-9170
Institutional support: RVO:68081715
Keywords : barley * beer * gycation * protein
OECD category: Analytical chemistry
Impact factor: 1.6, year: 2022
Method of publishing: Limited access
Permanent Link: https://hdl.handle.net/11104/0353843File Download Size Commentary Version Access 0586290.pdf 1 2.1 MB Publisher’s postprint require - 3.0586126 - MBÚ 2025 RIV NL eng J - Journal Article
Weber, P. - Bojarová, Pavla - Brouzdová, Jitka - Křen, Vladimír - Kulik, Natalia - Stütz, A.E. - Thonhofer, M. - Wrodnigg, T.M.
Diaminocyclopentane – l-Lysine Adducts: Potent and selective inhibitors of human O-GlcNAcase.
Bioorganic Chemistry. Roč. 148, July 2024 (2024), č. článku 107452. ISSN 0045-2068. E-ISSN 1090-2120
R&D Projects: GA ČR(CZ) GF21-01948L; GA MŠMT(CZ) EH22_008/0004597
Research Infrastructure: e-INFRA CZ - 90140; CERIT-SC - 90085; CESNET II - 90042
Institutional support: RVO:61388971
Keywords : Glycosidase * Inhibition * Inhibition * O-GlcNAcase * Hexosaminidase * Diaminocyclopentane * Tau protein * Alzheimer’s disease
OECD category: Biochemistry and molecular biology
Impact factor: 5.1, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0045206824003572
Permanent Link: https://hdl.handle.net/11104/0353722File Download Size Commentary Version Access Diaminocyclopentane – l-Lysine Adducts.pdf 0 7.4 MB Publisher’s postprint open-access - 4.0585960 - ÚOCHB 2025 RIV AT eng C - Conference Paper (international conference)
Bushuiev, A. - Bushuiev, Roman - Sedlář, J. - Pluskal, Tomáš - Damborský, J. - Mazurenko, S. - Šivic, J.
Revealing data leakage in protein interaction benchmarks.
GEM-2024. ICLR 2024 Workshop on Generative and Experimental Perspectives for Biomolecular Design. Vienna: ICLR, 2024.
[ICLR 2024. International Conference on Learning Representations /12./. Vienna (AT), 07.05.2024-11.05.2024]
R&D Projects: GA MŠMT(CZ) LM2023055; GA ČR(CZ) GM21-11563M
EU Projects: European Commission(XE) 891397 - KavaTarget
Research Infrastructure: e-INFRA CZ II - 90254; RECETOX RI II - 90269
Institutional support: RVO:61388963
Keywords : protein-protein interactions * data leakage * benchmarks * data splits
OECD category: Other biological topics
https://openreview.net/forum?id=ORMXYUK5IY
Permanent Link: https://hdl.handle.net/11104/0353594File Download Size Commentary Version Access 0585960.pdf 0 1.7 MB Publisher’s postprint open-access - 5.0585931 - ÚOCHB 2025 RIV AT eng C - Conference Paper (international conference)
Kirjner, A. - Yim, J. - Samusevich, Raman - Bracha, S. - Jaakkola, T. - Barzilay, R. - Fiete, I.
Improving protein optimization with smoothed fitness landscapes.
ICLR 2024. The Twelfth International Conference on Learning Representations. Vienna: ICLR, 2024.
[ICLR 2024. International Conference on Learning Representations /12./. Vienna (AT), 07.05.2024-11.05.2024]
Research Infrastructure: e-INFRA CZ II - 90254
Institutional support: RVO:61388963
Keywords : protein design * discrete optimization * protein engineering * Markov chain Monte Carlo * graph signal processing
OECD category: Other biological topics
https://openreview.net/forum?id=rxlF2Zv8x0
Permanent Link: https://hdl.handle.net/11104/0353566File Download Size Commentary Version Access 0585931.pdf 0 1.5 MB Publisher’s postprint open-access - 6.0585897 - ÚOCHB 2025 RIV AT eng C - Conference Paper (international conference)
Bushuiev, A. - Bushuiev, Roman - Kouba, P. - Filkin, A. - Gabrielová, M. - Gabriel, M. - Sedlář, J. - Pluskal, Tomáš - Damborský, J. - Mazurenko, S. - Šivic, J.
Learning to design protein-protein interactions with enhanced generalization.
ICLR 2024. The Twelfth International Conference on Learning Representations. Vienna: ICLR, 2024.
[ICLR 2024. International Conference on Learning Representations /12./. Vienna (AT), 07.05.2024-11.05.2024]
R&D Projects: GA MŠMT(CZ) LM2023055; GA ČR(CZ) GM21-11563M
EU Projects: European Commission(XE) 891397 - KavaTarget
Research Infrastructure: e-INFRA CZ II - 90254; RECETOX RI II - 90269
Institutional support: RVO:61388963
Keywords : protein-protein interactions * protein design * generalization * self-supervised learning * equivariant 3D representations
OECD category: Other biological topics
https://openreview.net/forum?id=xcMmebCT7s
Permanent Link: https://hdl.handle.net/11104/0353542File Download Size Commentary Version Access 0585897.pdf 0 9.5 MB Publisher’s postprint open-access - 7.0585751 - ÚOCHB 2025 RIV US eng J - Journal Article
Kolouchová, K. - Herynek, V. - Groborz, Ondřej - Karela, J. - Van Damme, L. - Kučka, Jan - Šafanda, A. - Bui, Q. H. - Šefc, L. - van Vlierberghe, S.
19F MRI In Vivo Monitoring of Gelatin-Based Hydrogels: 3D Scaffolds with Tunable Biodegradation toward Regenerative Medicine.
Chemistry of Materials. Roč. 36, č. 9 (2024), s. 4417-4425. ISSN 0897-4756. E-ISSN 1520-5002
Institutional support: RVO:61388963 ; RVO:61389013
Keywords : degradation * protein
Subject RIV: CD - Macromolecular Chemistry (UMCH-V)
OECD category: Polymer science (UMCH-V)
Impact factor: 8.6, year: 2022
Method of publishing: Limited access
https://doi.org/10.1021/acs.chemmater.3c03321
Permanent Link: https://hdl.handle.net/11104/0353430 - 8.0585740 - ÚOCHB 2025 RIV US eng J - Journal Article
Sülzen, Hagen - Volkov, A. N. - Geens, R. - Zahedifard, F. - Stijlemans, B. - Zoltner, M. - Magez, S. - Sterckx, Y. G.-J. - Zoll, Sebastian
Beyond the VSG Layer: Exploring the Role of Intrinsic Disorder in the Invariant Surface Glycoproteins of African Trypanosomes.
PLoS Pathogens. Roč. 20, č. 4 (2024), č. článku e1012186. ISSN 1553-7366. E-ISSN 1553-7374
R&D Projects: GA ČR(CZ) GA22-21612S
Research Infrastructure: CESNET II - 90042; CIISB II - 90127
Institutional support: RVO:61388963
Keywords : x-ray-scattering * protein secondary structure * antigenic determinants
Impact factor: 6.7, year: 2022
Method of publishing: Open access
https://doi.org/10.1371/journal.ppat.1012186
Permanent Link: https://hdl.handle.net/11104/0353423 - 9.0585625 - ÚEB 2025 RIV US eng J - Journal Article
Pavlovič, A. - Kopečná, M. - Hloušková, Lucie - Koller, J. - Hřivňacký, M. - Ilík, P. - Bartoš, Jan
Diethyl ether anaesthesia inhibits de-etiolation of barley seedlings by locking them in intermediate skoto-photomorphogenetic state.
Physiologia Plantarum. Roč. 176, č. 1 (2024), č. článku e14144. ISSN 0031-9317. E-ISSN 1399-3054
Research Infrastructure: e-INFRA CZ II - 90254
Institutional support: RVO:61389030
Keywords : NADPH-PROTOCHLOROPHYLLIDE-OXIDOREDUCTASE * LIGHT-HARVESTING COMPLEXES * A-B PROTEIN
OECD category: Biochemistry and molecular biology
Impact factor: 6.4, year: 2022
Method of publishing: Open access
https://doi.org/10.1111/ppl.14144
Permanent Link: https://hdl.handle.net/11104/0353305File Download Size Commentary Version Access 2024_Pavlovic_PHYSIOLOGIA PLANTARUM_e14144.pdf 1 10.7 MB Other open-access - 10.0585509 - MBÚ 2025 RIV US eng J - Journal Article
Polák, Marek - Černý, Jiří - Novák, Petr
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis.
Analytical Chemistry. Roč. 96, č. 4 (2024), s. 1478-1487. ISSN 0003-2700. E-ISSN 1520-6882
R&D Projects: GA MŠMT(CZ) LX22NPO5107; GA ČR(CZ) GA22-27695S; GA MŠMT(CZ) LM2018127; GA MŠMT(CZ) LM2023055; GA MŠMT(CZ) ED1.1.00/02.0109
EU Projects: European Commission(XE) 731077 - EU_FT-ICR_MS; European Commission(XE) 823839 - EPIC-XS
Research Infrastructure: CIISB II - 90127
Institutional support: RVO:61388971 ; RVO:86652036
Keywords : fast photochemical oxidation * amino-acid-residues * radiolytic modification * hydrogen-peroxide * structural probes * molecular-mass * cytochrome-c * protein * peptides * exchange
OECD category: Microbiology
Impact factor: 7.4, year: 2022
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.analchem.3c03759
Permanent Link: https://hdl.handle.net/11104/0353192