Search results
- 1.0447582 - BFÚ 2016 RIV US eng J - Journal Article
Dubecký, M. - Walter, Nils G. - Šponer, Jiří - Otyepka, M. - Banáš, Pavel
Chemical Feasibility of the General Acid/Base Mechanism of glmS Ribozyme Self-Cleavage.
Biopolymers. Roč. 103, č. 10 (2015), s. 550-562. ISSN 0006-3525. E-ISSN 1097-0282
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0068; GA ČR(CZ) GAP208/12/1878
Institutional support: RVO:68081707
Keywords : MOLECULAR-DYNAMICS SIMULATIONS * ACTIVE-SITE GUANINE * HAIRPIN RIBOZYME
Subject RIV: BO - Biophysics
Impact factor: 2.248, year: 2015
Permanent Link: http://hdl.handle.net/11104/0249403 - 2.0373416 - BFÚ 2012 RIV US eng J - Journal Article
Mlýnský, V. - Banáš, P. - Hollas, D. - Réblová, Kamila - Walter, N.G. - Šponer, Jiří - Otyepka, M.
Extensive molecular dynamics simulations showing that canonical G8 and protonated A38H+ forms are most consistent with crystal structures of hairpin ribozyme.
Journal of Physical Chemistry B. Roč. 114, č. 19 (2010), s. 6642-6652. ISSN 1520-6106. E-ISSN 1520-5207
R&D Projects: GA MŠMT(CZ) LC06030; GA MŠMT(CZ) GD203/09/H046
Keywords : molecular dynamics simulations * hairpin ribozyme
Subject RIV: BO - Biophysics
Impact factor: 3.603, year: 2010
Permanent Link: http://hdl.handle.net/11104/0006880 - 3.0345016 - BFÚ 2011 RIV US eng J - Journal Article
Mlýnský, V. - Banáš, P. - Hollas, D. - Réblová, Kamila - Walter, N.G. - Šponer, Jiří - Otyepka, M.
Extensive molecular dynamics simulations showing that canonical G8 and protonated A38H+ forms are most consistent with crystal structures of hairpin ribozyme.
Journal of Physical Chemistry B. Roč. 114, č. 19 (2010), s. 6642-6652. ISSN 1520-6106. E-ISSN 1520-5207
R&D Projects: GA MŠMT(CZ) LC06030; GA ČR(CZ) GA203/09/1476; GA MŠMT(CZ) GD203/09/H046; GA AV ČR(CZ) IAA400040802; GA AV ČR(CZ) KJB400040901; GA AV ČR(CZ) 1QS500040581
Grant - others:GA MŠk(CZ) LC512
Program: LC
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : molecular dynamics simulations * hairpin ribozyme
Subject RIV: BO - Biophysics
Impact factor: 3.603, year: 2010
Permanent Link: http://hdl.handle.net/11104/0005937 - 4.0040671 - BFÚ 2007 RIV US eng J - Journal Article
Rhodes, Maria M. - Réblová, Kamila - Šponer, Jiří - Walter, Nils G.
Trapped water molecules are essential to structural dynamics and function of a ribozyme.
[Zachycené molekuly vody jsou esenciální pro strukturní dynamiku a funkci ribozymu.]
Proceedings of the National Academy of Sciences of the United States of America. Roč. 103, č. 36 (2006), s. 13380-13385. ISSN 0027-8424. E-ISSN 1091-6490
R&D Projects: GA ČR(CZ) GA203/05/0009; GA ČR(CZ) GA203/05/0388; GA AV ČR(CZ) 1QS500040581; GA MŠMT(CZ) LC512; GA MŠMT(CZ) LC06030
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z40550506
Keywords : coupled molecular motions * hairpin ribozyme * molecular dynamics
Subject RIV: BO - Biophysics
Impact factor: 9.643, year: 2006
Permanent Link: http://hdl.handle.net/11104/0134340