Search results
- 1.0573561 - MBÚ 2024 RIV GB eng J - Journal Article
Kachale, A. - Pavlíková, Zuzana - Nenarokova, A. - Roithová, Adriana - Durante, I. M. - Miletínová, Petra - Záhonová, K. - Nenarokov, S. - Votýpka, J. - Horáková, Eva - Ross, R. L. - Yurchenko, V. - Beznosková, Petra - Paris, Z. - Valášek, Leoš Shivaya - Lukeš, J.
Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment.
Nature. Roč. 613, č. 7965 (2023), s. 751-758. ISSN 0028-0836. E-ISSN 1476-4687
R&D Projects: GA ČR(CZ) GA20-00579S
Grant - others:AV ČR(CZ) Premium Academiae of the Academy of Sciences of the Czech Republic
Program: Akademická prémie - Praemium Academiae
Research Infrastructure: e-INFRA CZ - 90140; Czech-BioImaging II - 90129
Institutional support: RVO:61388971
Keywords : nuclear genetic-code * identity elements * translation * recognition * degradation * evolution * nonsense * binds
OECD category: Biochemistry and molecular biology
Impact factor: 64.8, year: 2022
Method of publishing: Limited access
https://www.nature.com/articles/s41586-023-06260-9
Permanent Link: https://hdl.handle.net/11104/0343987 - 2.0571540 - BTÚ 2024 RIV US eng J - Journal Article
Chaudhari, Aditya S. - Chatterjee, Aditi - Domingos, C. A. O. - Andrikopoulos, Prokopis C. - Liu, Yingliang - Andersson, Inger - Schneider, Bohdan - Lorenz-Fonfria, Victor A. - Fuertes, Gustavo
Genetically encoded non-canonical amino acids reveal asynchronous dark reversion of chromophore, backbone, and side-chains in EL222.
Protein Science. Roč. 32, č. 4 (2023), č. článku e4590. ISSN 0961-8368. E-ISSN 1469-896X
R&D Projects: GA MŠMT(CZ) EF18_046/0015974; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) LM2018127
Institutional support: RVO:86652036
Keywords : flavoproteins * FTIR spectroscopy * genetic code expansion * kinetics * vis spectroscopy
OECD category: Biochemistry and molecular biology
Impact factor: 8, year: 2022
Method of publishing: Open access
https://onlinelibrary.wiley.com/doi/10.1002/pro.4590
Permanent Link: https://hdl.handle.net/11104/0347902 - 3.0559020 - ÚOCHB 2023 RIV GB eng J - Journal Article
Tretyachenko, V. - Vymětal, Jiří - Neuwirthova, T. - Vondrášek, Jiří - Fujishima, K. - Hlouchová, Klára
Modern and prebiotic amino acids support distinct structural profiles in proteins.
Open Biology. Roč. 12, č. 6 (2022), č. článku 220040. E-ISSN 2046-2441
Institutional support: RVO:61388963
Keywords : protein sequence space * protein structure * amino acid alphabet * genetic code evolution * random proteins
OECD category: Biochemistry and molecular biology
Impact factor: 5.8, year: 2022
Method of publishing: Open access
https://doi.org/10.1098/rsob.220040
Permanent Link: https://hdl.handle.net/11104/0332442 - 4.0556783 - ÚOCHB 2023 RIV US eng J - Journal Article
Giacobelli, V. G. - Fujishima, K. - Lepšík, Martin - Tretyachenko, V. - Kadavá, T. - Makarov, M. - Bednárová, Lucie - Novák, Petr - Hlouchová, Klára
In Vitro Evolution Reveals Noncationic Protein-RNA Interaction Mediated by Metal Ions.
Molecular Biology and Evolution. Roč. 39, č. 3 (2022), č. článku msac032. ISSN 0737-4038. E-ISSN 1537-1719
R&D Projects: GA MŠMT(CZ) EF16_019/0000729; GA MŠMT(CZ) ED1.1.00/02.0109
EU Projects: European Commission(XE) 823839 - EPIC-XS
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:61388963 ; RVO:61388971
Keywords : RNA-protein interaction * genetic code evolution * protein evolution * mRNA-display
OECD category: Biochemistry and molecular biology
Impact factor: 10.7, year: 2022
Method of publishing: Open access
https://doi.org/10.1093/molbev/msac032
Permanent Link: http://hdl.handle.net/11104/0330979File Download Size Commentary Version Access 0556783.pdf 5 982.6 KB Publisher’s postprint open-access
Research data: Mendeley Data - 5.0543393 - MBÚ 2022 RIV GB eng J - Journal Article
Beznosková, Petra - Bidou, L. - Namy, O. - Valášek, Leoš Shivaya
Increased expression of tryptophan and tyrosine tRNAs elevates stop codon readthrough of reporter systems in human cell lines.
Nucleic Acids Research. Roč. 49, č. 9 (2021), s. 5202-5215. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GA20-00579S; GA ČR(CZ) GA18-02014S
Institutional support: RVO:61388971
Keywords : cognate transfer-rnas * messenger-rna * termination codons * genetic-code * translation * cancer * nonsense * downstream * efficiency * sense
OECD category: Microbiology
Impact factor: 19.160, year: 2021
Method of publishing: Open access
https://academic.oup.com/nar/article/49/9/5202/6261788?login=true
Permanent Link: http://hdl.handle.net/11104/0320610 - 6.0541647 - ÚOCHB 2022 RIV US eng J - Journal Article
Makarov, M. - Meng, J. - Tretyachenko, V. - Srb, Pavel - Březinová, A. - Giacobelli, V. G. - Bednárová, Lucie - Vondrášek, Jiří - Dunker, A. K. - Hlouchová, Klára
Enzyme catalysis prior to aromatic residues: Reverse engineering of a dephospho‐CoA kinase.
Protein Science. Roč. 30, č. 5 (2021), s. 1022-1034. ISSN 0961-8368. E-ISSN 1469-896X
Research Infrastructure: CIISB II - 90127
Institutional support: RVO:61388963
Keywords : aromatic amino acids * catalysis evolution * genetic code evolution * protein disorder * protein structure evolution
OECD category: Biochemistry and molecular biology
Impact factor: 6.993, year: 2021
Method of publishing: Limited access
https://doi.org/10.1002/pro.4068
Permanent Link: http://hdl.handle.net/11104/0319182 - 7.0507481 - ÚMG 2020 RIV GB eng J - Journal Article
Panek, T. - Zihala, D. - Sokol, M. - Derelle, R. - Klimeš, V. - Hradilová, Miluše - Zadrobilkova, E. - Susko, E. - Roger, A. J. - Čepička, I. - Eliáš, M.
Nuclear genetic codes with a different meaning of the UAG and the UAA codon.
BMC BIOLOGY. Roč. 15, February (2017), č. článku 8. E-ISSN 1741-7007
Institutional support: RVO:68378050
Keywords : Codon reassignment * Evolution * Evolutionary constraint * Fornicata * Genetic code * Iotanema spirale * Lygus hesperus * Protists * Rhizaria * Transcriptome
OECD category: Cell biology
Impact factor: 5.770, year: 2017
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-017-0353-y
Permanent Link: http://hdl.handle.net/11104/0298463 - 8.0483943 - FLÚ 2018 RIV CH eng J - Journal Article
Svoboda, Jan - Svoboda, Jan
The Platonic Receptacle (Hypodoché), Whitehead’s Philosophy, and Genome Evolution.
Viruses. Roč. 9, č. 12 (2017), s. 1-3, č. článku 381. E-ISSN 1999-4915
Institutional support: RVO:67985955 ; RVO:68378050
Keywords : Platonic receptacle * Whitehead’s argument * realization of ideas * present day genetics * genetic code * evolution changes
OECD category: Philosophy, History and Philosophy of science and technology; Virology (UMG-J)
Impact factor: 3.761, year: 2017
Method of publishing: Open access
http://www.mdpi.com/1999-4915/9/12/381
Permanent Link: http://hdl.handle.net/11104/0279117 - 9.0362929 - MÚ 2012 RIV CZ cze J - Journal Article
Křížek, Michal - Křížek, P.
Proč má DNA tři terminační triplety a jen jeden iniciační?
[Why does DNA have three terminal triplets and only one initial triplet?]
Pokroky matematiky, fyziky & astronomie. Roč. 56, č. 2 (2011), s. 98-105. ISSN 0032-2423
R&D Projects: GA AV ČR(CZ) IAA100190803
Institutional research plan: CEZ:AV0Z10190503
Keywords : genetic code * codon * transtation * degenerated code * synchronization shift
Subject RIV: EB - Genetics ; Molecular Biology
http://dml.cz/dmlcz/141994
Permanent Link: http://hdl.handle.net/11104/0199096File Download Size Commentary Version Access Krizek4.pdf 2 822.7 KB Publisher’s postprint open-access - 10.0086756 - BFÚ 2008 RIV CZ cze J - Journal Article
Kejnovský, Eduard
Genetický kód. Náhodné zamrznutí, nebo postupný vývoj?
[Genetic code. Frozen accident or evolution?]
Vesmír. Roč. 86, č. 137 (2007), s. 588-590. ISSN 0042-4544. E-ISSN 1214-4029
R&D Projects: GA ČR(CZ) GA204/05/2097
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : genetic code * early evolution * RNA world
Subject RIV: BO - Biophysics
Permanent Link: http://hdl.handle.net/11104/0004164