Search results

  1. 1.
    0574464 - BC 2024 RIV GB eng J - Journal Article
    Obiol, A. - Lopez-Escardo, D. - Salomaki, Eric David - Wisniewska, Monika Magdalena - Forn, I. - Sa, E. - Vaque, D. - Kolísko, Martin - Massana, R.
    Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory.
    Microbiome. Roč. 11, č. 1 (2023), č. článku 134. ISSN 2049-2618. E-ISSN 2049-2618
    R&D Projects: GA MŠMT(CZ) EF20_079/0017809
    Institutional support: RVO:60077344
    Keywords : Bacterivory * Heterotrophic flagellates * Metatranscriptomics * Functional genes * Unamended incubations * Phagocytosis * Peptidases * Glycosidases
    OECD category: Biochemistry and molecular biology
    Impact factor: 15.5, year: 2022
    Method of publishing: Open access
    https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-023-01571-5
    Permanent Link: https://hdl.handle.net/11104/0345915
     
     
  2. 2.
    0558788 - BC 2023 RIV DE eng J - Journal Article
    Tashyreva, Daria - Simpson, A.G.B. - Prokopchuk, Galina - Škodová-Sveráková, Ingrid - Butenko, Anzhelika - Hammond, Michael John - George, E.E. - Flegontova, Olga - Záhonová, Kristýna - Faktorová, Drahomíra - Yabuki, A. - Horák, Aleš - Keeling, P.J. - Lukeš, Julius
    Diplonemids-A Review on New Flagellates on the Oceanic Block.
    Protist. Roč. 173, č. 2 (2022), č. článku 125868. ISSN 1434-4610. E-ISSN 1618-0941
    R&D Projects: GA ČR(CZ) GA18-23787S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2018129
    Grant - others:Gordon and Betty Moore Foundation(US) #9354
    Program: Science
    Institutional support: RVO:60077344
    Keywords : ambulator larsen * phylogenetic position * microbial eukaryotes * euglena-gracilis * diversity * sea * patterson * protozoa * light * gene * Protists * taxonomic revision * ultrastructure * Euglenozoa * ecology * marine flagellates
    OECD category: Ecology
    Impact factor: 2.5, year: 2022
    Method of publishing: Open access
    https://www.sciencedirect.com/science/article/pii/S143446102200013X?via%3Dihub
    Permanent Link: https://hdl.handle.net/11104/0340424
     
     
  3. 3.
    0542712 - MBÚ 2022 RIV CH eng J - Journal Article
    Piwosz, Kasia - Mukherjee, Indranil - Salcher, Michaela M. - Grujcic, V. - Šimek, Karel
    CARD-FISH in the Sequencing Era: Opening a New Universe of Protistan Ecology.
    Frontiers in Microbiology. Roč. 12, MAR 4 2021 (2021), č. článku 640066. ISSN 1664-302X. E-ISSN 1664-302X
    R&D Projects: GA ČR(CZ) GJ18-14095Y; GA ČR(CZ) GX20-12496X; GA ČR(CZ) GA19-23469S; GA MŠMT(CZ) EF16_025/0007417; GA ČR(CZ) GA13-00243S
    Institutional support: RVO:61388971 ; RVO:60077344
    Keywords : aquatic microbial food webs * card-fish * grazing by protists * protists * unicellular eukaryotes * bacterivorous * omnivorous and predatory flagellates * heterotrophic and mixotrophic flagellates
    OECD category: Microbiology; Microbiology (BC-A)
    Impact factor: 6.064, year: 2021
    Method of publishing: Open access
    https://www.frontiersin.org/articles/10.3389/fmicb.2021.640066/full
    Permanent Link: http://hdl.handle.net/11104/0320081
     
     
  4. 4.
    0538633 - BC 2021 RIV GB eng J - Journal Article
    Šimek, Karel - Grujčič, Vesna - Mukherjee, Indranil - Kasalický, Vojtěch - Nedoma, Jiří - Posch, T. - Mehrshad, Maliheh - Salcher, Michaela M.
    Cascading effects in freshwater microbial food webs by predatory Cercozoa, Katablepharidacea and ciliates feeding on aplastidic bacterivorous cryptophytes.
    FEMS Microbiology Ecology. Roč. 96, č. 10 (2020), č. článku fiaa121. ISSN 0168-6496. E-ISSN 1574-6941
    R&D Projects: GA MŠMT(CZ) EF16_025/0007417; GA ČR(CZ) GA13-00243S; GA ČR(CZ) GA19-23469S; GA ČR(CZ) GX20-12496X
    Institutional support: RVO:60077344
    Keywords : ciliates * bacterivorous and predatory flagellates * Cercozoa * Cryptophyceae * freshwater microbial food webs * Katablepharidacea
    OECD category: Ecology
    Impact factor: 4.194, year: 2020
    Method of publishing: Open access
    https://doi.org/10.1093/femsec/fiaa121
    Permanent Link: http://hdl.handle.net/11104/0316400
    FileDownloadSizeCommentaryVersionAccess
    SIMEK FEMS Microbiol Ecol 2020.pdf03.9 MBAuthor´s preprintopen-access
     
     
  5. 5.
    0520426 - BC 2020 RIV DE eng J - Journal Article
    Prokopchuk, Galina - Tashyreva, Daria - Yabuki, A. - Horák, Aleš - Masařová, Petra - Lukeš, Julius
    Morphological, Ultrastructural, Motility and Evolutionary Characterization of Two New Hemistasiidae Species.
    Protist. Roč. 170, č. 3 (2019), s. 259-282. ISSN 1434-4610. E-ISSN 1618-0941
    R&D Projects: GA ČR(CZ) GA16-18699S; GA ČR(CZ) GA18-23787S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2015062; GA MŠMT(CZ) EF16_013/0001775
    Institutional support: RVO:60077344
    Keywords : diplonema-ambulator larsen * flagellates protista * sequence alignment * phylogeny * marine * patterson * redescription * euglenozoon * homologies * colorless * Diplonemids * Hemistasiidae * rickettsiid * endosymbiosis * extrusome
    OECD category: Genetics and heredity (medical genetics to be 3)
    Impact factor: 1.989, year: 2019
    Method of publishing: Limited access
    https://www.sciencedirect.com/science/article/abs/pii/S1434461018301391?via%3Dihub
    Permanent Link: http://hdl.handle.net/11104/0305102
     
     
  6. 6.
    0517802 - BC 2021 RIV DE eng J - Journal Article
    Weinbauer, M.G. - Suominen, S. - Jezbera, Jan - Kerros, M. E. - Marro, S. - Dolan, J. R. - Šimek, Karel
    Shifts in cell size and community composition of bacterioplankton due to grazing by heterotrophic flagellates: evidence from a marine system.
    Aquatic Microbial Ecology. Roč. 83, č. 3 (2019), s. 295-308. ISSN 0948-3055. E-ISSN 1616-1564
    R&D Projects: GA ČR(CZ) GA13-00243S
    Institutional support: RVO:60077344
    Keywords : flagellates * bacteria * diversity * life strategies * grazing defense
    OECD category: Microbiology
    Impact factor: 1.841, year: 2019
    Method of publishing: Limited access
    https://www.int-res.com/abstracts/ame/v83/n3/p295-308/
    Permanent Link: http://hdl.handle.net/11104/0303308
     
     
  7. 7.
    0507429 - BC 2020 RIV GB eng M - Monography Chapter
    Stern, R. - Esson, Heather - Balestreri, C.
    PHYTOPLANKTON: FLAGELLATES.
    MOŘSKÝ PLANKTON: PRAKTICKÝ PRŮVODCE EKOLOGII, METODOLOGII A TAXONOMY. 1. New York: Oxford : University Press, 2016, 2017, s. 167-179. ISBN 9780199233267
    Institutional support: RVO:60077344
    Keywords : marine flagellates * taxonomy * phytoplankton * life cycle * ecology * morphology
    OECD category: Ecology
    Permanent Link: http://hdl.handle.net/11104/0298416
     
     
  8. 8.
    0498832 - BC 2019 RIV DE eng J - Journal Article
    Tashyreva, Daria - Prokopchuk, Galina - Yabuki, A. - Kaur, Binnypreet - Faktorová, Drahomíra - Votýpka, Jan - Kusaka, C. - Fujikura, K. - Shiratori, T. - Ishida, K. I. - Horák, Aleš - Lukeš, Julius
    Phylogeny and Morphology of New Diplonemids from Japan.
    Protist. Roč. 169, č. 2 (2018), s. 158-179. ISSN 1434-4610. E-ISSN 1618-0941
    R&D Projects: GA MŠMT LL1601; GA ČR(CZ) GA14-23986S; GA MŠMT(CZ) LM2015062
    Institutional support: RVO:60077344
    Keywords : description * Diplonema * Euglenozoa * flagellates. * phylogeny * ultrastructure
    OECD category: Genetics and heredity (medical genetics to be 3)
    Impact factor: 3.000, year: 2018
    Permanent Link: http://hdl.handle.net/11104/0291105
     
     
  9. 9.
    0450149 - BC 2016 RIV DE eng J - Journal Article
    Weinbauer, M.G. - Dolan, J. R. - Šimek, Karel
    A population of giant tailed virus-like particles associated with heterotrophic flagellates in a lake-type reservoir.
    Aquatic Microbial Ecology. Roč. 76, č. 2 (2015), s. 111-116. ISSN 0948-3055. E-ISSN 1616-1564
    R&D Projects: GA ČR(CZ) GA13-00243S
    Institutional support: RVO:60077344
    Keywords : viral infection * virus induced mortality * burst size * heterotrophic flagellates
    Subject RIV: EE - Microbiology, Virology
    Impact factor: 2.109, year: 2015
    Permanent Link: http://hdl.handle.net/11104/0251651
     
     
  10. 10.
    0445920 - BC 2016 RIV US eng J - Journal Article
    Grujčič, Vesna - Kasalický, Vojtěch - Šimek, Karel
    Prey-specific growth responses of freshwater flagellate communities induced by morphologically distinct bacteria from the genus Limnohabitans.
    Applied and Environmental Microbiology. Roč. 81, č. 15 (2015), s. 4993-5002. ISSN 0099-2240. E-ISSN 1098-5336
    R&D Projects: GA ČR(CZ) GA13-00243S; GA MŠMT(CZ) EE2.3.30.0032
    Institutional support: RVO:60077344
    Keywords : freshwater reservoir * heterotrophic flagellate bacterivory * Limnohabitans * bacterial food quality * growth responses of flagellates
    Subject RIV: EH - Ecology, Behaviour
    Impact factor: 3.823, year: 2015
    Permanent Link: http://hdl.handle.net/11104/0251537
     
     

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