Search results
- 1.0574464 - BC 2024 RIV GB eng J - Journal Article
Obiol, A. - Lopez-Escardo, D. - Salomaki, Eric David - Wisniewska, Monika Magdalena - Forn, I. - Sa, E. - Vaque, D. - Kolísko, Martin - Massana, R.
Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory.
Microbiome. Roč. 11, č. 1 (2023), č. článku 134. ISSN 2049-2618. E-ISSN 2049-2618
R&D Projects: GA MŠMT(CZ) EF20_079/0017809
Institutional support: RVO:60077344
Keywords : Bacterivory * Heterotrophic flagellates * Metatranscriptomics * Functional genes * Unamended incubations * Phagocytosis * Peptidases * Glycosidases
OECD category: Biochemistry and molecular biology
Impact factor: 15.5, year: 2022
Method of publishing: Open access
https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-023-01571-5
Permanent Link: https://hdl.handle.net/11104/0345915 - 2.0558788 - BC 2023 RIV DE eng J - Journal Article
Tashyreva, Daria - Simpson, A.G.B. - Prokopchuk, Galina - Škodová-Sveráková, Ingrid - Butenko, Anzhelika - Hammond, Michael John - George, E.E. - Flegontova, Olga - Záhonová, Kristýna - Faktorová, Drahomíra - Yabuki, A. - Horák, Aleš - Keeling, P.J. - Lukeš, Julius
Diplonemids-A Review on New Flagellates on the Oceanic Block.
Protist. Roč. 173, č. 2 (2022), č. článku 125868. ISSN 1434-4610. E-ISSN 1618-0941
R&D Projects: GA ČR(CZ) GA18-23787S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2018129
Grant - others:Gordon and Betty Moore Foundation(US) #9354
Program: Science
Institutional support: RVO:60077344
Keywords : ambulator larsen * phylogenetic position * microbial eukaryotes * euglena-gracilis * diversity * sea * patterson * protozoa * light * gene * Protists * taxonomic revision * ultrastructure * Euglenozoa * ecology * marine flagellates
OECD category: Ecology
Impact factor: 2.5, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S143446102200013X?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0340424 - 3.0542712 - MBÚ 2022 RIV CH eng J - Journal Article
Piwosz, Kasia - Mukherjee, Indranil - Salcher, Michaela M. - Grujcic, V. - Šimek, Karel
CARD-FISH in the Sequencing Era: Opening a New Universe of Protistan Ecology.
Frontiers in Microbiology. Roč. 12, MAR 4 2021 (2021), č. článku 640066. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA ČR(CZ) GJ18-14095Y; GA ČR(CZ) GX20-12496X; GA ČR(CZ) GA19-23469S; GA MŠMT(CZ) EF16_025/0007417; GA ČR(CZ) GA13-00243S
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : aquatic microbial food webs * card-fish * grazing by protists * protists * unicellular eukaryotes * bacterivorous * omnivorous and predatory flagellates * heterotrophic and mixotrophic flagellates
OECD category: Microbiology; Microbiology (BC-A)
Impact factor: 6.064, year: 2021
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fmicb.2021.640066/full
Permanent Link: http://hdl.handle.net/11104/0320081 - 4.0538633 - BC 2021 RIV GB eng J - Journal Article
Šimek, Karel - Grujčič, Vesna - Mukherjee, Indranil - Kasalický, Vojtěch - Nedoma, Jiří - Posch, T. - Mehrshad, Maliheh - Salcher, Michaela M.
Cascading effects in freshwater microbial food webs by predatory Cercozoa, Katablepharidacea and ciliates feeding on aplastidic bacterivorous cryptophytes.
FEMS Microbiology Ecology. Roč. 96, č. 10 (2020), č. článku fiaa121. ISSN 0168-6496. E-ISSN 1574-6941
R&D Projects: GA MŠMT(CZ) EF16_025/0007417; GA ČR(CZ) GA13-00243S; GA ČR(CZ) GA19-23469S; GA ČR(CZ) GX20-12496X
Institutional support: RVO:60077344
Keywords : ciliates * bacterivorous and predatory flagellates * Cercozoa * Cryptophyceae * freshwater microbial food webs * Katablepharidacea
OECD category: Ecology
Impact factor: 4.194, year: 2020
Method of publishing: Open access
https://doi.org/10.1093/femsec/fiaa121
Permanent Link: http://hdl.handle.net/11104/0316400File Download Size Commentary Version Access SIMEK FEMS Microbiol Ecol 2020.pdf 0 3.9 MB Author´s preprint open-access - 5.0520426 - BC 2020 RIV DE eng J - Journal Article
Prokopchuk, Galina - Tashyreva, Daria - Yabuki, A. - Horák, Aleš - Masařová, Petra - Lukeš, Julius
Morphological, Ultrastructural, Motility and Evolutionary Characterization of Two New Hemistasiidae Species.
Protist. Roč. 170, č. 3 (2019), s. 259-282. ISSN 1434-4610. E-ISSN 1618-0941
R&D Projects: GA ČR(CZ) GA16-18699S; GA ČR(CZ) GA18-23787S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2015062; GA MŠMT(CZ) EF16_013/0001775
Institutional support: RVO:60077344
Keywords : diplonema-ambulator larsen * flagellates protista * sequence alignment * phylogeny * marine * patterson * redescription * euglenozoon * homologies * colorless * Diplonemids * Hemistasiidae * rickettsiid * endosymbiosis * extrusome
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 1.989, year: 2019
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/abs/pii/S1434461018301391?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0305102 - 6.0517802 - BC 2021 RIV DE eng J - Journal Article
Weinbauer, M.G. - Suominen, S. - Jezbera, Jan - Kerros, M. E. - Marro, S. - Dolan, J. R. - Šimek, Karel
Shifts in cell size and community composition of bacterioplankton due to grazing by heterotrophic flagellates: evidence from a marine system.
Aquatic Microbial Ecology. Roč. 83, č. 3 (2019), s. 295-308. ISSN 0948-3055. E-ISSN 1616-1564
R&D Projects: GA ČR(CZ) GA13-00243S
Institutional support: RVO:60077344
Keywords : flagellates * bacteria * diversity * life strategies * grazing defense
OECD category: Microbiology
Impact factor: 1.841, year: 2019
Method of publishing: Limited access
https://www.int-res.com/abstracts/ame/v83/n3/p295-308/
Permanent Link: http://hdl.handle.net/11104/0303308 - 7.0507429 - BC 2020 RIV GB eng M - Monography Chapter
Stern, R. - Esson, Heather - Balestreri, C.
PHYTOPLANKTON: FLAGELLATES.
MOŘSKÝ PLANKTON: PRAKTICKÝ PRŮVODCE EKOLOGII, METODOLOGII A TAXONOMY. 1. New York: Oxford : University Press, 2016, 2017, s. 167-179. ISBN 9780199233267
Institutional support: RVO:60077344
Keywords : marine flagellates * taxonomy * phytoplankton * life cycle * ecology * morphology
OECD category: Ecology
Permanent Link: http://hdl.handle.net/11104/0298416 - 8.0498832 - BC 2019 RIV DE eng J - Journal Article
Tashyreva, Daria - Prokopchuk, Galina - Yabuki, A. - Kaur, Binnypreet - Faktorová, Drahomíra - Votýpka, Jan - Kusaka, C. - Fujikura, K. - Shiratori, T. - Ishida, K. I. - Horák, Aleš - Lukeš, Julius
Phylogeny and Morphology of New Diplonemids from Japan.
Protist. Roč. 169, č. 2 (2018), s. 158-179. ISSN 1434-4610. E-ISSN 1618-0941
R&D Projects: GA MŠMT LL1601; GA ČR(CZ) GA14-23986S; GA MŠMT(CZ) LM2015062
Institutional support: RVO:60077344
Keywords : description * Diplonema * Euglenozoa * flagellates. * phylogeny * ultrastructure
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 3.000, year: 2018
Permanent Link: http://hdl.handle.net/11104/0291105 - 9.0450149 - BC 2016 RIV DE eng J - Journal Article
Weinbauer, M.G. - Dolan, J. R. - Šimek, Karel
A population of giant tailed virus-like particles associated with heterotrophic flagellates in a lake-type reservoir.
Aquatic Microbial Ecology. Roč. 76, č. 2 (2015), s. 111-116. ISSN 0948-3055. E-ISSN 1616-1564
R&D Projects: GA ČR(CZ) GA13-00243S
Institutional support: RVO:60077344
Keywords : viral infection * virus induced mortality * burst size * heterotrophic flagellates
Subject RIV: EE - Microbiology, Virology
Impact factor: 2.109, year: 2015
Permanent Link: http://hdl.handle.net/11104/0251651 - 10.0445920 - BC 2016 RIV US eng J - Journal Article
Grujčič, Vesna - Kasalický, Vojtěch - Šimek, Karel
Prey-specific growth responses of freshwater flagellate communities induced by morphologically distinct bacteria from the genus Limnohabitans.
Applied and Environmental Microbiology. Roč. 81, č. 15 (2015), s. 4993-5002. ISSN 0099-2240. E-ISSN 1098-5336
R&D Projects: GA ČR(CZ) GA13-00243S; GA MŠMT(CZ) EE2.3.30.0032
Institutional support: RVO:60077344
Keywords : freshwater reservoir * heterotrophic flagellate bacterivory * Limnohabitans * bacterial food quality * growth responses of flagellates
Subject RIV: EH - Ecology, Behaviour
Impact factor: 3.823, year: 2015
Permanent Link: http://hdl.handle.net/11104/0251537