Search results
- 1.0574417 - ÚMG 2024 RIV CH eng J - Journal Article
Hoboth, Peter - Sztacho, Martin - Quaas, A. - Akguel, B. - Hozák, Pavel
Quantitative super-resolution microscopy reveals the differences in the nanoscale distribution of nuclear phosphatidylinositol 4,5-bisphosphate in human healthy skin and skin warts.
Frontiers in Cell and Developmental Biology. Roč. 11, Jul (2023), č. článku 1217637. ISSN 2296-634X. E-ISSN 2296-634X
R&D Projects: GA MŠMT(CZ) EF16_013/0001775; GA MŠMT(CZ) EF18_046/0016045; GA TA ČR(CZ) TN02000122; GA TA ČR(CZ) TN02000020; GA MŠMT(CZ) LM2018129; GA MŠMT LTC19048; GA MŠMT LTC20024
EU Projects: European Commission(XE) CA15214 - EuroCellNet; European Commission(XE) CA19105 - EpiLipidNET
Institutional support: RVO:68378050
Keywords : formalin-fixed paraffin-embedded tissue sections * STED nanoscopy * cell nucleus * human papillomavirus (HPV) * nuclear architecture * phosphatidylinositol 4,5-bisphosphate * nuclear speckles * quantitative image analysis
OECD category: Cell biology
Impact factor: 5.5, year: 2022
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fcell.2023.1217637/full
Permanent Link: https://hdl.handle.net/11104/0344745 - 2.0566546 - ÚEB 2023 RIV US eng J - Journal Article
Randall, R. S. - Jourdain, C. - Nowicka, Anna - Kaduchová, Kateřina - Kubová, M. - Ayoub, M. A. - Schubert, V. - Tatout, C. - Colas, I. - Kalyanikrishna, A. - Desset, S. - Mermet, S. - Boulaflous-Stevens, A. - Kubalová, I. - Mandáková, T. - Heckmann, S. - Lysák, M. A. - Panatta, M. - Santoro, R. - Schubert, D. - Pečinka, Aleš - Routh, D. - Baroux, C.
Image analysis workflows to reveal the spatial organization of cell nuclei and chromosomes.
Nucleus. Roč. 13, č. 1 (2022), s. 277-299. ISSN 1949-1034. E-ISSN 1949-1042
R&D Projects: GA MŠMT(CZ) EF16_019/0000827; GA MŠMT(CZ) LM2018129; GA ČR(CZ) GA21-02929S
Institutional support: RVO:61389030
Keywords : 3D organization * chromatin * chromosome * crossovers * image analysis * meiosis * metaphase * mitosis * nuclear bodies * nuclear speckles * Nucleus * oligo FISH * pachytene * quantification * RNA Pol II * segmentation * sim * spatial distribution * STED imaging * transcription factories
OECD category: Cell biology
Impact factor: 3.7, year: 2022
Method of publishing: Open access
https://doi.org/10.1080/19491034.2022.2144013
Permanent Link: https://hdl.handle.net/11104/0337871File Download Size Commentary Version Access 2022_Randall_NUCLEUS_277.pdf 2 39 MB Other open-access - 3.0555845 - ÚMG 2022 RIV AT eng O - Others
Hoboth, Peter - Sztacho, Martin - Šebesta, O. - Hozák, Pavel
Unraveling the phospholipid identity of the gene expression compartments by single molecule localization microscopy.
2021
R&D Projects: GA ČR GA19-05608S; GA ČR(CZ) GA18-19714S; GA MŠMT LTC19048; GA MŠMT LTC20024; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) EF16_013/0001775
Research Infrastructure: Czech-BioImaging II - 90129
Institutional support: RVO:68378050
Keywords : single-molecule localization microscopy * nuclear phosphatidylinositol phosphates * nucleoplasm * nuclear speckles * RNA polymerase II transcription
OECD category: Cell biology
Permanent Link: http://hdl.handle.net/11104/0330310 - 4.0555844 - ÚMG 2022 RIV CZ eng O - Others
Hoboth, Peter - Sztacho, Martin - Šebesta, O. - Hozák, Pavel
Unraveling the phospholipid identity of the gene expression compartments by single molecule localization microscopy.
2021
R&D Projects: GA ČR GA19-05608S; GA ČR(CZ) GA18-19714S; GA MŠMT LTC19048; GA MŠMT LTC20024; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) EF16_013/0001775
Research Infrastructure: Czech-BioImaging II - 90129
Institutional support: RVO:68378050
Keywords : single-molecule localization microscopy * nuclear phosphatidylinositol phosphates * nucleoplasm * nuclear speckles * RNA polymerase II transcription
OECD category: Cell biology
Permanent Link: http://hdl.handle.net/11104/0330301 - 5.0555749 - ÚMG 2022 RIV DE eng O - Others
Hoboth, Peter - Sztacho, Martin - Šebesta, O. - Hozák, Pavel
Phospholipid identity of the ene expression compartments.
2021
R&D Projects: GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) EF16_013/0001775; GA ČR GA19-05608S; GA ČR(CZ) GA18-19714S; GA MŠMT LTC19048; GA MŠMT LTC20024; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:68378050
Keywords : single-molecule localization microscopy * nuclear phosphatidylinositol phosphates * nucleoplasm * nuclear speckles * RNA polymerase II transcription
OECD category: Cell biology
Permanent Link: http://hdl.handle.net/11104/0330208 - 6.0555746 - ÚMG 2022 RIV DE eng O - Others
Hoboth, Peter - Sztacho, Martin - Šebesta, O. - Hozák, Pavel
Unraveling the phospholipid identity of the gene expression compartments by Q-DC-dSTORM.
2021
R&D Projects: GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) EF16_013/0001775; GA ČR GA19-05608S; GA ČR(CZ) GA18-19714S; GA MŠMT LTC19048; GA MŠMT LTC20024; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:68378050
Keywords : quantitative dual-color direct stochastic optical reconstruction microscopy * nuclear phosphatidylinositol phosphates * nucleoplasm * nuclear speckles * RNA polymerase II transcription
OECD category: Cell biology
Permanent Link: http://hdl.handle.net/11104/0330205 - 7.0554635 - ÚMG 2022 RIV NL eng J - Journal Article
Hoboth, Peter - Šebesta, O. - Sztacho, Martin - Castano, Enrique - Hozák, Pavel
Dual-color dSTORM imaging and ThunderSTORM image reconstruction and analysis to study the spatial organization of the nuclear phosphatidylinositol phosphates.
MethodsX. Roč. 8, May (2021), č. článku 101372. E-ISSN 2215-0161
R&D Projects: GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) EF16_013/0001775; GA ČR GA19-05608S; GA ČR(CZ) GA18-19714S; GA MŠMT LTC19048; GA MŠMT LTC20024; GA MŠMT(CZ) ED1.1.00/02.0109
Research Infrastructure: Czech-BioImaging II - 90129
Institutional support: RVO:68378050
Keywords : Immunofluorescence * Wide-field microscopy * Super-resolution microscopy * ImageJ * Nearest neighbor distance * Cell nucleus * Nuclear architecture * Nuclear speckles * son * RNA polymerase II * Fibrillarin
OECD category: Cell biology
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S2215016121001655?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0329333 - 8.0541561 - BFÚ 2022 RIV CH eng J - Journal Article
Komůrková, Denisa - Svobodová Kovaříková, Alena - Bártová, Eva
G-Quadruplex Structures Colocalize with Transcription Factories and Nuclear Speckles Surrounded by Acetylated and Dimethylated Histones H3.
International Journal of Molecular Sciences. Roč. 22, č. 4 (2021), č. článku 1995. E-ISSN 1422-0067
R&D Projects: GA ČR(CZ) GA18-07384S
Institutional support: RVO:68081707
Keywords : G-quadruplex structure * epigenetics * nuclear bodies * transcription factories * nuclear speckles * DNA repair
OECD category: Biochemistry and molecular biology
Impact factor: 6.208, year: 2021
Method of publishing: Open access
https://www.mdpi.com/1422-0067/22/4/1995
Permanent Link: http://hdl.handle.net/11104/0319103 - 9.0541498 - ÚMG 2021 RIV GB eng J - Journal Article
Hoboth, Peter - Sztacho, Martin - Šebesta, O. - Schätz, M. - Castano, Enrique - Hozák, Pavel
Nanoscale mapping of nuclear phosphatidylinositol phosphate landscape by dual-color dSTORM.
Biochimica Et Biophysica Acta-Molecular and Cell Biology of Lipids. Roč. 1866, č. 5 (2021), č. článku 158890. ISSN 1388-1981. E-ISSN 1879-2618
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) EF16_013/0001775; GA ČR GA19-05608S; GA ČR(CZ) GA18-19714S; GA MŠMT LTC19048; GA MŠMT LTC20024
Institutional support: RVO:68378050
Keywords : Cell nucleus * Nuclear speckles * Nucleolus * Phosphatidylinositol phosphates * RNA polymerase II * STORM
OECD category: Cell biology
Impact factor: 5.228, year: 2021
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S1388198121000160?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0319061 - 10.0306720 - BFÚ 2008 RIV NL eng J - Journal Article
Bártová, Eva - Harničarová, Andrea - Kroupová, Jana - Strašák, Luděk - Kozubek, Stanislav
Single-cell c-myc gene expression in relationship to nuclear domains.
[Exprese c-myc genu ve vztahu k jaderným doménám.]
Chromosome Research. Roč. 16, č. 2 (2008), s. 325-343. ISSN 0967-3849. E-ISSN 1573-6849
R&D Projects: GA ČR(CZ) GA204/06/0978; GA MŠMT(CZ) LC535; GA AV ČR(CZ) 1QS500040508; GA AV ČR(CZ) IAA5004306; GA MŠMT(CZ) 1P05OC084; GA MŠMT(CZ) LC06027
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : c-myc gene * nuclear speckles * nucleolus
Subject RIV: BO - Biophysics
Impact factor: 3.405, year: 2008
Permanent Link: http://hdl.handle.net/11104/0159674