Search results

  1. 1.
    0585334 - FGÚ 2025 RIV GB eng J - Journal Article
    Honzejková, K. - Košek, Dalibor - Obšilová, Veronika - Obšil, Tomáš
    The cryo-EM structure of ASK1 reveals an asymmetric architecture allosterically modulated by TRX1.
    eLife. Roč. 13, Mar 27 (2024), č. článku RP95199. ISSN 2050-084X. E-ISSN 2050-084X
    R&D Projects: GA ČR(CZ) GA19-00121S
    Research Infrastructure: CIISB III - 90242
    Institutional support: RVO:67985823
    Keywords : MAP3K * ASK1 kinase * Thioredoxin * cryo-EM
    OECD category: Biochemistry and molecular biology
    Impact factor: 7.7, year: 2022
    Method of publishing: Open access
    https://doi.org/10.7554/eLife.95199.2
    Permanent Link: https://hdl.handle.net/11104/0353047
     
     
  2. 2.
    0583349 - ÚOCHB 2025 RIV US eng J - Journal Article
    Dhillon, Arun - Persson, B. D. - Volkov, A. N. - Sülzen, Hagen - Kádek, Alan - Pompach, Petr - Kereiche, Sami - Lepšík, Martin - Danskog, K. - Uetrecht, C. - Arnberg, N. - Zoll, Sebastian
    Structural insights into the interaction between adenovirus C5 hexon and human lactoferrin.
    Journal of Virology. Roč. 98, č. 3 (2024), č. článku e01576-23. ISSN 0022-538X. E-ISSN 1098-5514
    R&D Projects: GA MŠMT LM2023042; GA MŠMT(CZ) EF18_046/0015974
    Institutional support: RVO:61388963 ; RVO:61388971 ; RVO:86652036
    Keywords : adenovirus * lactoferrin * cryo-EM * immune evasion * viral entry
    OECD category: Virology (MBU-M)
    Impact factor: 5.4, year: 2022
    Method of publishing: Open access
    https://doi.org/10.1128/jvi.01576-23
    Permanent Link: https://hdl.handle.net/11104/0351321
     

    Research data: ZENODO
     
  3. 3.
    0581637 - ÚOCHB 2024 RIV eng A - Abstract
    Bulvas, Ondřej - Knejzlík, Zdeněk - Kouba, Tomáš - Pichová, Iva
    Complex allosteric regulation of mycobacterial inosine-5′-monophosphate dehydrogenase by purine nucleotides.
    [Discussions in Structural Molecular Biology /19./ and User Meeting of CIISB (Czech Infrastructure for Integrative Structural Biology) /6./. Nové Hrady, 23.03.2023-25.03.2023]
    Method of presentation: Přednáška
    Event organizer: Czech Society for Structural Biology
    URL events: https://cssb.structbio.org/xix-discussions-in-structural-molecular-biology-and-6th-user-meeting-of-ciisb-czech-infrastructure-for-integrative-structural-biology/ 
    R&D Projects: GA MŠMT(CZ) LX22NPO5103
    Research Infrastructure: CIISB II - 90127
    Institutional support: RVO:61388963
    Keywords : allosteric regulation * inosine-5′-monophosphate dehydrogenase (IMPDH) * cryo-EM analysis
    OECD category: Biochemistry and molecular biology
    https://www.xray.cz/setkani/abst2023/630.htm
    Permanent Link: https://hdl.handle.net/11104/0349746
     
     
  4. 4.
    0579851 - ÚMG 2024 RIV US eng J - Journal Article
    Pánek, J. - Roithová, Adriana - Radivojevic, Nenad - Sýkora, Michal - Prusty, A. B. - Huston, N. - Wan, H. - Pyle, A. M. - Fischer, U. - Staněk, David
    The SMN complex drives structural changes in human snRNAs to enable snRNP assembly.
    Nature Communications. Roč. 14, č. 1 (2023), č. článku 6580. E-ISSN 2041-1723
    R&D Projects: GA ČR GA21-04132S; GA MŠMT(CZ) LM2023055; GA MŠMT(CZ) LM2015062; GA MŠMT(CZ) EF16_013/0001775
    EU Projects: European Commission(CZ) CZ.2.16/3.1.00/21547
    Institutional support: RVO:68378050
    Keywords : small nuclear-rna * cryo-em structure * dead-box protein * u1 snrnp * cajal bodies * core domain * molecular architecture * degradation pathway * spliceosomal snrnps * crystal-structure
    OECD category: Biochemistry and molecular biology
    Impact factor: 16.6, year: 2022
    Method of publishing: Open access
    https://www.nature.com/articles/s41467-023-42324-0
    Permanent Link: https://hdl.handle.net/11104/0348643
     
     
  5. 5.
    0576863 - ÚOCHB 2025 RIV GB eng J - Journal Article
    Kosenina, S. - Škerlová, Jana - Zhang, S. - Dong, M. - Stenmark, P.
    The cryo-EM structure of the BoNT/Wo-NTNH complex reveals two immunoglobulin-like domains.
    FEBS Journal. Roč. 291, č. 4 (2024), s. 676-689. ISSN 1742-464X. E-ISSN 1742-4658
    R&D Projects: GA MŠMT(CZ) EF16_027/0008477
    Institutional support: RVO:61388963
    Keywords : BoNT-NTNH complex * botulinum neurotoxins * cryo-EM structure * Weissella oryzae
    OECD category: Medicinal chemistry
    Impact factor: 5.4, year: 2022
    Method of publishing: Open access
    https://doi.org/10.1111/febs.16964
    Permanent Link: https://hdl.handle.net/11104/0346268
     

    Research data: EMDB, PDB
     
  6. 6.
    0575001 - MBÚ 2024 RIV US eng J - Journal Article
    Zhao, Z. - Vercellino, I. - Knoppová, Jana - Sobotka, Roman - Murray, James W. - Nixon, Peter J. - Sazanov, Leonid A. - Komenda, Josef
    The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis.
    Nature Communications. Roč. 14, č. 1 (2023), č. článku 4681. E-ISSN 2041-1723
    R&D Projects: GA ČR(CZ) GX19-29225X
    EU Projects: European Commission(CZ) 854126 - PhotoRedesign
    Institutional support: RVO:61388971
    Keywords : sp. pcc 6803 * crystal-structure * water-oxidation * initial steps * cryo-em * protein * complex * d1i * insights * subunit
    OECD category: Microbiology
    Impact factor: 16.6, year: 2022
    Method of publishing: Open access
    https://www.nature.com/articles/s41467-023-40388-6
    Permanent Link: https://hdl.handle.net/11104/0344876
     
     
  7. 7.
    0572588 - ÚTIA 2024 RIV SI eng J - Journal Article
    Salman, I. - Vomlel, Jiří
    Learning the Structure of Bayesian Networks from Incomplete Data Using a Mixture Model.
    International Journal of Computing and Informatics. Roč. 47, č. 1 (2023), s. 83-96. ISSN 0350-5596
    Institutional support: RVO:67985556
    Keywords : Bayesian networks * Gaussian mixtures * EM algorithm * incomplete data
    OECD category: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
    Method of publishing: Open access
    http://library.utia.cas.cz/separaty/2023/MTR/vomlel-0572588.pdf https://www.informatica.si/index.php/informatica/article/view/4497
    Permanent Link: https://hdl.handle.net/11104/0343822
     
     
  8. 8.
    0569718 - BFÚ 2024 RIV NL eng J - Journal Article
    Veverka, Pavel - Brom, T. - Janovic, T. - Stojaspal, Martin - Pinkas, M. - Nováček, J. - Hofr, C.
    Electron microscopy reveals toroidal shape of master neuronal cell differentiator REST RE1-silencing transcription factor.
    Computational and Structural Biotechnology Journal. Roč. 21, JAN 2023 (2023), s. 731-741. ISSN 2001-0370. E-ISSN 2001-0370
    Institutional support: RVO:68081707
    Keywords : rest * RE1-silencing transcription factor * Neuron-restrictive silencer factor * Neuronal * Differentiation * rest-n62 * rest4 * nrsf * em * Electron microscopy
    OECD category: Biochemistry and molecular biology
    Impact factor: 6, year: 2022
    Method of publishing: Open access
    https://www.csbj.org/action/showPdf?pii=S2001-0370%2822%2900582-7
    Permanent Link: https://hdl.handle.net/11104/0344342
     
     
  9. 9.
    0567393 - ÚMG 2023 RIV US eng J - Journal Article
    Zapletal, D. - Táborská, Eliška - Pasulka, Josef - Malík, Radek - Kubíček, Karel - Zanova, M. - Much, C. - Šebesta, M. - Buccheri, Valeria - Horvat, Filip - Jeníčková, Irena - Procházková, Michaela - Procházka, Jan - Pinkas, M. - Nováček, J. - Florian Joseph, Diego André - Sedláček, Radislav - Bernecky, C. - O'Carroll, D. - Štefl, R. - Svoboda, Petr
    Structural and functional basis of mammalian microRNA biogenesis by Dicer.
    Molecular Cell. Roč. 82, č. 21 (2022), s. 4064-4079e.13. ISSN 1097-2765. E-ISSN 1097-4164
    R&D Projects: GA MŠMT(CZ) LM2018126; GA MŠMT(CZ) LM2018131; GA ČR GX20-03950X; GA MŠMT EF18_046/0015861
    EU Projects: European Commission(XE) 647403 - D-FENS
    Research Infrastructure: e-INFRA CZ - 90140; CIISB II - 90127
    Institutional support: RVO:68378050
    Keywords : cryo-em structure * guide strand selection * rna-binding * structure validation * expression * molprobity * trbp complex * mouse * specifity
    OECD category: Biochemistry and molecular biology
    Impact factor: 16, year: 2022
    Method of publishing: Open access
    https://doi.org/10.1016/j.molcel.2022.10.010
    Permanent Link: https://hdl.handle.net/11104/0338651
     
     
  10. 10.
    0566032 - ÚOCHB 2023 RIV GB eng J - Journal Article
    Asai, Seiya - Moravcová, J. - Žáková, Lenka - Selicharová, Irena - Hadravová, Romana - Brzozowski, A. M. - Nováček, J. - Jiráček, Jiří
    Characterization of insulin crystalline form in isolated β-cell secretory granules.
    Open Biology. Roč. 12, č. 12 (2022), č. článku 220322. E-ISSN 2046-2441
    R&D Projects: GA MŠMT(CZ) EF16_019/0000729
    Research Infrastructure: CIISB II - 90127
    Institutional support: RVO:61388963
    Keywords : insulin secretory granules * protein crystals * in vivo crystalization * cryo-EM
    OECD category: Cell biology
    Impact factor: 5.8, year: 2022
    Method of publishing: Open access
    https://doi.org/10.1098/rsob.220322
    Permanent Link: https://hdl.handle.net/11104/0337471
     
     

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