Number of the records: 1

Transcriptome of barley under three different heavy metal stress reaction

SYSNO ASEP	0482959
Document Type	J - Journal Article
R&D Document Type	Journal Article
Subsidiary J	Článek ve WOS
Title	Transcriptome of barley under three different heavy metal stress reaction
Author(s)	Kintlová, Martina (UEB-Q) Blavet, Nicolas (UEB-Q)_{RID, ORCID} Cegan, R. (CZ) Hobza, Roman (UEB-Q)_{RID, ORCID}
Number of authors	4
Source Title	GENOMICS DATA - ISSN 2213-5960 Roč. 13, SEP (2017), s. 15-17
Number of pages	3 s.
Language	eng - English
Country	NL - Netherlands
Keywords	plants ; Barley ; RNA-Seq ; Transcriptome ; Heavy metal ; Copper ; Zinc ; Cadmium
Subject RIV	EB - Genetics ; Molecular Biology
OECD category	Plant sciences, botany
R&D Projects	GBP501/12/G090 GA ČR - Czech Science Foundation (CSF)
Institutional support	UEB-Q - RVO:61389030
UT WOS	000415937000006
EID SCOPUS	85020182457
DOI	10.1016/j.gdata.2017.05.016
Annotation	In the present study, we used Illumina sequencing technology (HiSeq 2000) to sequence the transcriptome of barley (Hordeum vulgare L., cv. Morex) under three different heavy metal stress conditions: copper, zinc and cadmium. For each of those metals, the concentration causing a 50% inhibitory effect for root growth (EC50) was determined. We sequenced the total RNA of both roots and shoots from barley with and without heavy metal treatments in three replicates. Raw reads of the transcriptome project have been deposited in NCBI's BioProject accession number PRJNA382490. The obtained transcriptomic data will be useful for further studies focusing on heavy metal tolerance and comparative transcriptome analysis in barley.
Workplace	Institute of Experimental Botany
Contact	David Klier, knihovna@ueb.cas.cz, Tel.: 220 390 469
Year of Publishing	2018

Number of the records: 1