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The pangenome of banana highlights differences between genera and genomes
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SYSNO ASEP 0557703 Document Type J - Journal Article R&D Document Type Journal Article Subsidiary J Článek ve WOS Title The pangenome of banana highlights differences between genera and genomes Author(s) Rijzaani, H. (AU)
Bayer, P.E. (AU)
Rouard, M. (FR)
Doležel, Jaroslav (UEB-Q) RID, ORCID
Batley, J. (AU)
Edwards, D. (AU)Number of authors 6 Article number e20100 Source Title Plant Genome. - : Wiley
Roč. 15, č. 1 (2022)Number of pages 11 s. Language eng - English Country US - United States Keywords ENSETE-VENTRICOSUM ; SEQUENCE ; PLANT OECD category Biochemistry and molecular biology R&D Projects EF16_019/0000827 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) Method of publishing Open access Institutional support UEB-Q - RVO:61389030 UT WOS 000669712500001 EID SCOPUS 85127142692 DOI 10.1002/tpg2.20100 Annotation Banana (Musaceae family) has a complex genetic history and includes a genus Musa with a variety of cultivated clones with edible fruits, Ensete species that are grown for their edible corm, and monospecific Musella whose generic status has been questioned. The most commonly exported banana cultivars belong to Cavendish, a subgroup of Musa triploid cultivars, which is under threat by fungal pathogens, though there are also related species M. balbisiana Colla (B genome), M. textilis Née (T genome), and M. schizocarpa N. W. Simmonds (S genome), along with hybrids of these genomes, which potentially host genes of agronomic interest. Here we present the first cross-genus pangenome of banana, which contains representatives of the Musa and Ensete genera. Clusters based on gene presence–absence variation (PAV) clearly separate Musa and Ensete, while Musa is split further based on species. These results present the first pangenome study across genus boundaries and identifies genes that differentiate between Musaceae species, information that may support breeding programs in these crops. Workplace Institute of Experimental Botany Contact David Klier, knihovna@ueb.cas.cz, Tel.: 220 390 469 Year of Publishing 2023 Electronic address http://doi.org/10.1002/tpg2.20100
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