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Computational image enhancement of multimode fibre-based holographic endo-microscopy: harnessing the muddy modes

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    SYSNO ASEP0548489
    Document TypeJ - Journal Article
    R&D Document TypeJournal Article
    Subsidiary JČlánek ve WOS
    TitleComputational image enhancement of multimode fibre-based holographic endo-microscopy: harnessing the muddy modes
    Author(s) Tučková, Tereza (UPT-D) ORCID
    Šiler, Martin (UPT-D) RID, ORCID, SAI
    Boonzajer Flaes, D. E. (DE)
    Jákl, Petr (UPT-D) RID, ORCID, SAI
    Turtaev, S. (DE)
    Krátký, Stanislav (UPT-D) RID, ORCID, SAI
    Heintzmann, R. (DE)
    Uhlířová, Hana (UPT-D) ORCID, RID
    Čižmár, Tomáš (UPT-D) RID, ORCID, SAI
    Number of authors9
    Source TitleOptics Express. - : Optical Society of America - ISSN 1094-4087
    Roč. 29, č. 23 (2021), s. 38206-38220
    Number of pages15 s.
    Publication formOnline - E
    Languageeng - English
    CountryUS - United States
    Keywordsmultimode optical fibre ; image reconstruction ; wavefront shaping ; poisson noise
    Subject RIVBH - Optics, Masers, Lasers
    OECD categoryOptics (including laser optics and quantum optics)
    R&D ProjectsLO1212 GA MŠMT - Ministry of Education, Youth and Sports (MEYS)
    EF15_003/0000476 GA MŠMT - Ministry of Education, Youth and Sports (MEYS)
    ED0017/01/01 GA MŠMT - Ministry of Education, Youth and Sports (MEYS)
    Method of publishingOpen access
    Institutional supportUPT-D - RVO:68081731
    UT WOS000716468800098
    EID SCOPUS85118720511
    DOI10.1364/OE.434848
    AnnotationIn imaging geometries, which employ wavefront-shaping to control the light transport through a multi-mode optical fibre (MMF), this terminal hair-thin optical component acts as a minimally invasive objective lens, enabling high resolution laser-scanning fluorescence microscopy inside living tissues at depths hardly accessible by any other light-based technique. Even in the most advanced systems, the diffraction-limited foci scanning the object across the focal plane are contaminated by a stray optical signal carrying typically few tens of % of the total optical power. The stray illumination takes the shape of a randomised but reproducible speckle, and is unique for each position of the focus. We experimentally demonstrate that the performance of imaging a fluorescent object can be significantly improved, when resulting images are computationally post-processed, utilising records of intensities of all speckle-contaminated foci used in the imaging procedure. We present two algorithms based on a regularised iterative inversion and regularised direct pseudo-inversion respectively which lead to enhancement of the image contrast and resolution.
    WorkplaceInstitute of Scientific Instruments
    ContactMartina Šillerová, sillerova@ISIBrno.Cz, Tel.: 541 514 178
    Year of Publishing2022
    Electronic addresshttps://www.osapublishing.org/oe/fulltext.cfm?uri=oe-29-23-38206&id=464465
Number of the records: 1  

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