Number of the records: 1  

Probes & Drugs portal: an interactive, open data resource for chemical biology

  1. 1.
    SYSNO ASEP0487037
    Document TypeJ - Journal Article
    R&D Document TypeJournal Article
    Subsidiary JČlánek ve WOS
    TitleProbes & Drugs portal: an interactive, open data resource for chemical biology
    Author(s) Škuta, Ctibor (UMG-J)
    Popr, M. (CZ)
    Muller, Tomáš (UMG-J)
    Jindřich, Jindřich (UMG-J)
    Kahle, Michal (UMG-J)
    Sedlák, David (UMG-J) RID
    Svozil, Daniel (UMG-J)
    Bartůněk, Petr (UMG-J) RID
    Number of authors8
    Source TitleNature Methods. - : Nature Publishing Group - ISSN 1548-7091
    Roč. 14, č. 8 (2017), s. 758-759
    Number of pages2 s.
    Languageeng - English
    CountryUS - United States
    Keywordsbioactive compound, ,, ; chemical probe ; chemical biology ; portal
    Subject RIVEB - Genetics ; Molecular Biology
    OECD categoryComputer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
    R&D ProjectsLO1220 GA MŠMT - Ministry of Education, Youth and Sports (MEYS)
    Institutional supportUMG-J - RVO:68378050
    UT WOS000406493800005
    DOI10.1038/nmeth.4365
    AnnotationWe report the Probes & Drugs (P&D) portal (https://www.probes-drugs.org), a powerful tool for the exploration of bioactive compound space. Chemical probes are indispensable tools in modern biology. These compounds are commonly used to study gene function, validate molecular targets or dissect complex processes within cells and organisms1,2,3. Unlike drugs, which are effective, bioavailable and safe compounds, a probe's main attributes reside in its potency, selectivity and well-defined mechanism of action. Yet identifying chemical probes that meet all the demands of an experimental design is not a trivial task. Information on candidate probes and their potency, mechanism of action or availability is typically scattered over various sources, and gathering such information can be very time consuming. In some cases, probe annotations may even be out of date, and this propagates the continued selection of probes in which the biological characteristics have been disproven and their suitability questioned4,5. Many of these compounds remain incorporated in commercial screening libraries and continue to be used by the community5,6.
    WorkplaceInstitute of Molecular Genetics
    ContactNikol Škňouřilová, nikol.sknourilova@img.cas.cz, Tel.: 241 063 217
    Year of Publishing2018
Number of the records: 1  

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