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Frequent Gene Movement and Pseudogene Evolution Is Common to the Large and Complex Genomes of Wheat, Barley, and Their Relatives
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SYSNO ASEP 0365266 Document Type J - Journal Article R&D Document Type Journal Article Subsidiary J Článek ve WOS Title Frequent Gene Movement and Pseudogene Evolution Is Common to the Large and Complex Genomes of Wheat, Barley, and Their Relatives Author(s) Wicker, T. (CH)
Mayer, K. F. X. (DE)
Šimková, Hana (UEB-Q) RID, ORCID
Kubaláková, Marie (UEB-Q) RID
Choulet, F. (FR)
Doležel, Jaroslav (UEB-Q) RID, ORCID
Stein, N. (CH)Number of authors 17 Source Title Plant Cell. - : Oxford University Press - ISSN 1040-4651
Roč. 23, č. 5 (2011), s. 1706-1718Number of pages 13 s. Language eng - English Country US - United States Keywords TRITICUM-AESTIVUM L. ; NUCLEAR-DNA CONTENT ; HIGH-THROUGHPUT Subject RIV EB - Genetics ; Molecular Biology R&D Projects LC06004 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) OC08025 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) CEZ AV0Z50380511 - UEB-Q (2005-2011) UT WOS 000292079800005 DOI 10.1105/tpc.111.086629 Annotation All six arms of the group 1 chromosomes of hexaploid wheat (Triticum aestivum) were sequenced with Roche/454 to 1.3- to 2.2-fold coverage and compared with similar data sets from the homoeologous chromosome 1H of barley (Hordeum vulgare). Six to ten thousand gene sequences were sampled per chromosome. These were classified into genes that have their closest homologs in the Triticeae group 1 syntenic region in Brachypodium, rice (Oryza sativa), and/or sorghum (Sorghum bicolor) and genes that have their homologs elsewhere in these model grass genomes. Although the number of syntenic genes was similar between the homologous groups, the amount of nonsyntenic genes was found to be extremely diverse between wheat and barley and even between wheat subgenomes. Besides a small core group of genes that are nonsyntenic in other grasses but conserved among Triticeae, we found thousands of genic sequences that are specific to chromosomes of one single species or subgenome. Workplace Institute of Experimental Botany Contact David Klier, knihovna@ueb.cas.cz, Tel.: 220 390 469 Year of Publishing 2012
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