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Error Assesment of Volume Reconstruction of Biological Specimen from Confocal Microscopy Images

SYSNO ASEP	0313831
Document Type	K - Proceedings Paper (Czech conf.)
R&D Document Type	Conference Paper
Title	Error Assesment of Volume Reconstruction of Biological Specimen from Confocal Microscopy Images
Title	Ohodnocení chyby objemové rekonstrukce biologických vzorků z konfokálních obrazů
Author(s)	Čapek, Martin (FGU-C)_{RID, ORCID} Janáček, Jiří (FGU-C)_{RID, ORCID} Kubínová, Lucie (FGU-C)_{RID, ORCID} Smrčka, P. (CZ) Hána, K. (CZ)
Source Title	CTU REPORTS : Proceedings of Workshop 2008. - Praha : CTU Publishing House, 2008 - ISBN 978-80-01-04016-4 S. 438-439
Number of pages	2 s.
Action	CTU Workshop 2008
Event date	18.02.2008-22.02.2008
VEvent location	Prague
Country	CZ - Czech Republic
Event type	CST
Language	eng - English
Country	CZ - Czech Republic
Keywords	error assessment ; volume reconstruction
Subject RIV	JD - Computer Applications, Robotics
R&D Projects	LC06063 GA MŠMT - Ministry of Education, Youth and Sports (MEYS)
	GA102/08/0691 GA ČR - Czech Science Foundation (CSF)
	IAA500200510 GA AV ČR - Academy of Sciences of the Czech Republic (AV ČR)
	IAA100110502 GA AV ČR - Academy of Sciences of the Czech Republic (AV ČR)
CEZ	AV0Z50110509 - FGU-C (2005-2011)
Annotation	We performed both volume reconstructions using images captured by the USB microscope and images captured by the confocal microscope. We manually marked important corresponding structures in both reconstructed data sets, and computed distances between corresponding structures, assuming that structures in the reconstruction from USB microscope data are without deformations. According to our expectations, the main errors of high-resolution volume reconstruction (from confocal data) are in the direction of physical cutting (vary in units of millimeters) and in the direction perpendicular to cutting due to off-cut (vary in tenths of millimeters)
Workplace	Institute of Physiology
Contact	Lucie Trajhanová, lucie.trajhanova@fgu.cas.cz, Tel.: 241 062 400
Year of Publishing	2009

Number of the records: 1