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Calculation of hydration sites of amino-acid conformers

SYSNO ASEP	0451955
Document Type	L4 - Software
R&D Document Type	Software
Title	Calculation of hydration sites of amino-acid conformers
Author(s)	Biedermannová, Lada (BTO-N)_{RID, ORCID}
Year of issue	2014
Int.Code	refine.sh
Technical parameters	BASH script, licence GPL 3
Economic parameters	typový projekt
Owner Name	Biotechnologický ústav AV ČR, v. v. i.
Registration Number of the result owner	86652036
Use by another entity	P - Využití výsledku jiným subjektem je v některých případech možné bez nabytí licence
License fee fee	N - Poskytovatel licence nepožaduje licenční poplatek
Internal identification code of the product assigned by its creator, Regulation no.,	57/2015
Language	eng - English
Country	CZ - Czech Republic
Keywords	protein hydration ; structural biology ; X-ray crystallography ; hydration sites ; density representation method
Subject RIV	BO - Biophysics
Subject RIV - cooperation	Biophysics
R&D Projects	GPP205/12/P729 GA ČR - Czech Science Foundation (CSF)
	ED1.1.00/02.0109 GA MŠMT - Ministry of Education, Youth and Sports (MEYS)
Institutional support	BTO-N - RVO:86652036
CEZ	AV0Z50520701 - BTO-N (2007-2013)
Annotation	Program converts clusters of hydrated amino-acid conformers into electron density, calculates crystallographic structure factors, finds hydration site positions as peaks in the electron density and performs "refinement" of the positions, calculating pseudo-ocuppancies and pseudo-B-factors of the hydration sites.
Workplace	Institute of Biotechnology
Contact	Monika Kopřivová, Monika.Koprivova@ibt.cas.cz, Tel.: 325 873 700
Year of Publishing	2016
Electronic address	http://www.dnatco.org/atlas/refine/

Number of the records: 1