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Nonrigid Registration of CLSM Images of Physical Sections with Discontinuous Deformations
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SYSNO ASEP 0369509 Document Type J - Journal Article R&D Document Type Journal Article Subsidiary J Článek ve WOS Title Nonrigid Registration of CLSM Images of Physical Sections with Discontinuous Deformations Author(s) Michálek, Jan (FGU-C) RID
Čapek, Martin (FGU-C) RID, ORCID
Kubínová, Lucie (FGU-C) RID, ORCIDSource Title Microscopy and Microanalysis. - : Cambridge University Press - ISSN 1431-9276
Roč. 17, č. 6 (2011), s. 923-936Number of pages 14 s. Language eng - English Country US - United States Keywords confocal microscopy ; image registration ; target image ; reference image ; total variation ; data term ; smoothness term ; L1-TV function ; E-L1-TV function ; graph cuts ; multilabel optimization ; local entropy Subject RIV JC - Computer Hardware ; Software R&D Projects GA102/08/0691 GA ČR - Czech Science Foundation (CSF) GA304/09/0733 GA ČR - Czech Science Foundation (CSF) LC06063 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) ME09010 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) MEB0810092 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) CEZ AV0Z50110509 - FGU-C (2005-2011) UT WOS 000297832300012 DOI 10.1017/S1431927611011937 Annotation When biological specimens are cut into physical sections for three-dimensional (3D) imaging by confocal laser scanning microscopy, the slices may get distorted or ruptured. For subsequent 3D reconstruction, images from different physical sections need to be spatially aligned by optimization of some functional. We present an optimization algorithm, which in the examined samples prevents artifacts produced by other methods Workplace Institute of Physiology Contact Lucie Trajhanová, lucie.trajhanova@fgu.cas.cz, Tel.: 241 062 400 Year of Publishing 2012
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