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Software for muscle fibre type classification and analysis
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SYSNO ASEP 0328584 Document Type J - Journal Article R&D Document Type Journal Article Subsidiary J Článek ve WOS Title Software for muscle fibre type classification and analysis Title Programy pro klasifikaci a analýzu typů svalových vláken Author(s) Karen, Petr (FGU-C)
Števanec, M. (SI)
Smerdu, V. (SI)
Cvetko, E. (SI)
Kubínová, Lucie (FGU-C) RID, ORCID
Eržen, I. (SI)Source Title European Journal of Histochemistry - ISSN 1121-760X
Roč. 53, č. 2 (2009), s. 87-95Number of pages 9 s. Language eng - English Country IT - Italy Keywords muscle fiber types ; myosin heavy chain isoforms ; image processing Subject RIV JC - Computer Hardware ; Software R&D Projects LC06063 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) MEB090910 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) CEZ AV0Z50110509 - FGU-C (2005-2011) UT WOS 000267417200004 Annotation Specialized computer programs for semiautomatic classification of muscle fibre types based on different staining of consecutive physical sections of muscle tissue is presented. An elastic registration algorithm is applied to warp the images to line-up corresponding control points determined by user. The mean luminance of the area outlined by the fibre contour is employed for the thresholds setting and the subsequent classification of the muscle fibre types. An instant visual feedback provides the user comprehensive information and the insight in the process of classification during the run of program. An exhaustive outline of the resulting classification in the form of MS Excel file is made available to the user. Described software is thoroughly tested on real-world data Workplace Institute of Physiology Contact Lucie Trajhanová, lucie.trajhanova@fgu.cas.cz, Tel.: 241 062 400 Year of Publishing 2010
Number of the records: 1