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Tryptophan to Tryptophan Hole Hopping in an Azurin Construct

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    SYSNO ASEP0582015
    Document TypeJ - Journal Article
    R&D Document TypeJournal Article
    Subsidiary JČlánek ve WOS
    TitleTryptophan to Tryptophan Hole Hopping in an Azurin Construct
    Author(s) Melčák, Martin (UFCH-W)
    Šebesta, Filip (UFCH-W)
    Heyda, Jan (UFCH-W) ORCID, RID
    Gray, H. B. (US)
    Záliš, Stanislav (UFCH-W) RID, ORCID
    Vlček, Antonín (UFCH-W) RID, ORCID
    Source TitleJournal of Physical Chemistry B. - : American Chemical Society - ISSN 1520-6106
    Roč. 128, č. 1 (2023), s. 96-108
    Number of pages13 s.
    Languageeng - English
    CountryUS - United States
    Keywordsaccelerated electron flow ; density-functional theory ; relaxation dynamics ; charge-transfer ; photolyase ; proteins ; cryptochromes ; transport
    Subject RIVCF - Physical ; Theoretical Chemistry
    OECD categoryPhysical chemistry
    R&D ProjectsGA21-05180S GA ČR - Czech Science Foundation (CSF)
    LTAUSA18026 GA MŠMT - Ministry of Education, Youth and Sports (MEYS)
    Research Infrastructuree-INFRA CZ II - 90254 - CESNET, zájmové sdružení právnických osob
    Method of publishingOpen access
    Institutional supportUFCH-W - RVO:61388955
    UT WOS001141711200001
    EID SCOPUS85181573648
    DOI10.1021/acs.jpcb.3c06568
    AnnotationElectron transfer (ET) between neutral and cationic tryptophan residues in the azurin construct [Re-I(H126)(CO)(3)(dmp)](W124)(W122)Cu-I (dmp = 4,7-Me-2-1,10-phenanthroline) was investigated by Born-Oppenheimer quantum-mechanics/molecular mechanics/molecular dynamics (QM/MM/MD) simulations. We focused on W124(center dot+) <- W122 ET, which is the middle step of the photochemical hole-hopping process *Re-II(CO)(3)(dmp(center dot-)) <- W124 <- W122 <- Cu-I, where sequential hopping amounts to nearly 10,000-fold acceleration over single-step tunneling (ACS Cent. Sci. 2019, 5, 192-200). In accordance with experiments, UKS-DFT QM/MM/MD simulations identified forward and reverse steps of W124(center dot+) - W122 ET equilibrium, as well as back ET Re-I(CO)(3)(dmp(center dot-))> W124(center dot+) that restores *Re-II(CO)(3)(dmp(center dot-)). Strong electronic coupling between the two indoles (>= 40 meV in the crossing region) makes the productive W124(center dot+) <- W122 ET adiabatic. Energies of the two redox states are driven to degeneracy by fluctuations of the electrostatic potential at the two indoles, mainly caused by water solvation, with contributions from the protein dynamics in the W122 vicinity. ET probability depends on the orientation of Re(CO)(3)(dmp) relative to W124 and its rotation diminishes the hopping yield. Comparison with hole hopping in natural systems reveals structural and dynamics factors that are important for designing efficient hole-hopping processes.
    WorkplaceJ. Heyrovsky Institute of Physical Chemistry
    ContactMichaela Knapová, michaela.knapova@jh-inst.cas.cz, Tel.: 266 053 196
    Year of Publishing2024
    Electronic addresshttps://hdl.handle.net/11104/0350145
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