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LP-12 Approaches to visualization of 3D structures captured by a confocal microscope
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SYSNO ASEP 0087268 Document Type C - Proceedings Paper (int. conf.) R&D Document Type Conference Paper Title LP-12 Approaches to visualization of 3D structures captured by a confocal microscope Title Přístupy k visualizaci obrazů 3D struktur získaných konfokálním mikroskopem Author(s) Čapek, Martin (FGU-C) RID, ORCID
Janáček, Jiří (FGU-C) RID, ORCID
Kubínová, Lucie (FGU-C) RID, ORCID
Hána, K. (CZ)
Smrčka, P. (CZ)Source Title Proceedings 8th multinational congress on microscopy. - České Budějovice : Czechoslovak microscopy society, 2007 / Nebesářová Jana ; Hozák Pavel - ISBN 978-80-239-9397-4 Pages s. 453-454 Number of pages 2 s. Action Multinational Congress on Microscopy /8./ Event date 17.06.2007-21.06.2007 VEvent location Prague Country CZ - Czech Republic Event type EUR Language eng - English Country CZ - Czech Republic Keywords confocal microscopy ; volume visualization Subject RIV JC - Computer Hardware ; Software R&D Projects IAA100110502 GA AV ČR - Academy of Sciences of the Czech Republic (AV ČR) IAA500200510 GA AV ČR - Academy of Sciences of the Czech Republic (AV ČR) GA304/05/0153 GA ČR - Czech Science Foundation (CSF) LC06063 GA MŠMT - Ministry of Education, Youth and Sports (MEYS) CEZ AV0Z50110509 - FGU-C (2005-2011) Annotation Laser scanning confocal microscopes are capable to focus a laser beam into a layer of an investigated biological specimen, and by the gradual scanning of this layer they acquire an optical section. By consecutive scanning of all preset layers of the specimen we obtain a stack of optical sections, i.e. a 3D digital representation of the specimen. In the presented study we focus on volume reconstruction of large biological tissues, i.e. tissues greater than field of view and/or thicker than maximal depth of scanning of a confocal microscope. As a result of volume reconstruction we obtain a high resolution 3D image of the biological specimen. 3D visualization is offered either by our Rapid3D software package suited for three-dimensional reconstruction and visualization of biomedical images, or Ellipse modular software package devoted to biological image processing (created by ViDiTo company, Slovakia) Workplace Institute of Physiology Contact Lucie Trajhanová, lucie.trajhanova@fgu.cas.cz, Tel.: 241 062 400 Year of Publishing 2008
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