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Comprehensive spectroscopic, metabolomic, and proteomic liquid biopsy in the diagnostics of hepatocellular carcinoma
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SYSNO ASEP 0582116 Document Type J - Journal Article R&D Document Type Journal Article Subsidiary J Článek ve WOS Title Comprehensive spectroscopic, metabolomic, and proteomic liquid biopsy in the diagnostics of hepatocellular carcinoma Author(s) Králová, K. (CZ)
Vrtelka, O. (CZ)
Fousková, M. (CZ)
Smirnova, T. A. (CZ)
Michálková, Lenka (UCHP-M) RID, ORCID, SAI
Hříbek, P. (CZ)
Urbánek, P. (CZ)
Kučková, Š. (CZ)
Setnička, V. (CZ)Article number 125527 Source Title Talanta. - : Elsevier - ISSN 0039-9140
Roč. 270, 1 April (2024)Number of pages 14 s. Language eng - English Country NL - Netherlands Keywords polymeric immunoglobulin receptor ; raman-spectroscopy ; liver-transplantation ; carboxypeptidase-n OECD category Analytical chemistry Method of publishing Open access with time embargo (02.04.2026) Institutional support UCHP-M - RVO:67985858 UT WOS 001144090900001 EID SCOPUS 85183581345 DOI 10.1016/j.talanta.2023.125527 Annotation Liquid biopsy is a very topical issue in clinical diagnostics research nowadays. In this study, we explored and compared various analytical approaches to blood plasma analysis. Finally, we proposed a comprehensive procedure, which, thanks to the utilization of multiple analytical techniques, allowed the targeting of various biomolecules in blood plasma reflecting diverse biological processes underlying disease development. The potential of such an approach, combining proteomics, metabolomics, and vibrational spectroscopy along with preceding blood plasma fractionation, was demonstrated on blood plasma samples of patients suffering from hepatocellular carcinoma in cirrhotic terrain (n = 20) and control subjects with liver cirrhosis (n = 20) as well as healthy subjects (n = 20). Most of the applied methods allowed the classification of the samples with an accuracy exceeding 80.0 % and therefore have the potential to be used as a stand-alone method in clinical diagnostics. Moreover, a final panel of 48 variables obtained by a combination of the utilized analytical methods enabled the discrimination of the hepatocellular carcinoma samples from cirrhosis with 94.3 % cross-validated accuracy. Thus, this study, although limited by the cohort size, clearly demonstrated the benefit of the multimethod approach in clinical diagnosis. Workplace Institute of Chemical Process Fundamentals Contact Eva Jirsová, jirsova@icpf.cas.cz, Tel.: 220 390 227 Year of Publishing 2025 Electronic address https://hdl.handle.net/11104/0350249
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