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A measure of bending in nucleic acids structures applied to A-tract DNA

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    0347727 - BFÚ 2011 RIV GB eng J - Journal Article
    Lankaš, Filip - Špačková, Naďa - Moakher, M. - Enkhbayar, P. - Šponer, Jiří
    A measure of bending in nucleic acids structures applied to A-tract DNA.
    Nucleic Acids Research. Roč. 38, č. 10 (2010), s. 3414-3422. ISSN 0305-1048. E-ISSN 1362-4962
    R&D Projects: GA MŠMT(CZ) LC06030
    Grant - others:GA MŠk(CZ) LC512
    Program: LC
    Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702; CEZ:AV0Z40550506
    Keywords : nucleic acids * DNA * molecular dynamics
    Subject RIV: BO - Biophysics
    Impact factor: 7.836, year: 2010

    A method is proposed to measure global bending in DNA and RNA structures. It relies on a properly defined averaging of base-fixed coordinate frames, computes mean frames of suitably chosen groups of bases and uses these mean frames to evaluate bending.
    Permanent Link: http://hdl.handle.net/11104/0188441

     
     
Number of the records: 1  

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