Regulatory Variation in Functionally Polymorphic Globin Genes of the Bank Vole: A Possible Role for Adaptation

0532020 - ÚŽFG 2021 RIV CH eng J - Journal Article
Dvořáková, Věra - Horníková, Michaela - Němcová, Lucie - Marková, Silvia - Kotlík, Petr
Regulatory Variation in Functionally Polymorphic Globin Genes of the Bank Vole: A Possible Role for Adaptation.
Frontiers in Ecology and Evolution. Roč. 7, JAN 14 (2020), č. článku 514. ISSN 2296-701X. E-ISSN 2296-701X
R&D Projects: GA ČR(CZ) GA16-03248S; GA MŠMT EF15_003/0000460; GA MŠMT EF16_027/0008502
Institutional support: RVO:67985904
Keywords : cysteine * gene expression * hemoglobin * Clethrionomys glareolus * oxidative stress * regulatory variation
OECD category: Ecology
Impact factor: 4.171, year: 2020
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fevo.2019.00514/full

Interaction between gene expression and protein-coding genetic variation is increasingly being appreciated as an important source of adaptive phenotypic variation. In this study, we used reverse transcription-qPCR to test for gene expression variation in two beta-globin paralogs (HBB-T1 and HBB-T2) of the Eurasian bank vole (Myodes glareolus), which both display the same structural polymorphism Ser52Cys responsible for variation in Cys-based antioxidant capacity of red blood cells (RBCs). We first demonstrated that HBB-T1 is the major expressed adult HBB gene in the bank vole accounting for similar to 85% of total hemoglobin. We then measured the relative expression of the two homozygous genotypes in each gene and found that when present in HBB-T1, the oxidative-stress resistant Cys52 allele is significantly associated with higher expression ratio HBB-T1:HBB-T2. The results further indicated that the Cys52 allele present in HBB-T1 was associated with higher normalized expression of that gene compared to the Ser52 allele, although this difference was statistically significant only when using one reference gene but not the other. We argue that, altogether, our results indicate the presence of a cis-acting regulatory genetic variation modulating the expression of the two alleles in HBB-T1. Previous studies indicated that the resistant RBC phenotype is likely beneficial under conditions conducive to oxidative stress. The duplicate HBB genes of the bank vole thus may represent a novel example of gene-regulatory genetic variation interacting with a well-defined protein-coding variation to control an adaptive trait.
Permanent Link: http://hdl.handle.net/11104/0310624