Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites

0453290 - BC 2016 RIV GB eng J - Journal Article
Woo, Y.H. - Ansari, H. - Otto, T.D. - Klinger, C.M. - Kolisko, M. - Michálek, Jan - Saxena, A. - Shanmugam, D. - Tayyrov, A. - Veluchamy, A. - Ali, S. - Bernal, A. - del Campo, J. - Cihlář, Jaromír - Flegontov, Pavel - Gornik, S.G. - Hajdušková, Eva - Horák, Aleš - Janouškovec, J. - Katris, N.J. - Mast, F.D. - Miranda-Saavedra, D. - Mourier, T. - Naeem, R. - Nair, M. - Panigrahi, A.K. - Rawlings, N.D. - Padron-Regalado, E. - Ramaprasad, A. - Samad, N. - Tomčala, Aleš - Wilkes, J. - Neafsey, D.E. - Doerig, C. - Bowler, C. - Keeling, P.J. - Roos, D.S. - Dacks, J.B. - Templeton, T.J. - Waller, R.F. - Lukeš, Julius - Oborník, Miroslav - Pain, A.
Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites.
eLife. Roč. 4, JUL 15 2015 (2015), e06974. ISSN 2050-084X. E-ISSN 2050-084X
R&D Projects: GA ČR GAP506/12/1522; GA ČR GBP501/12/G055; GA ČR GA13-33039S
Institutional support: RVO:60077344
Keywords : multiple sequence alignment * dense granule proteins * hidden markov model
Subject RIV: EE - Microbiology, Virology
Impact factor: 8.282, year: 2015

The eukaryotic phylum Apicomplexa encompasses thousands of obligate intracellular parasites of humans and animals with immense socio-economic and health impacts. We sequenced nuclear genomes of Chromera velia and Vitrella brassicaformis, free-living non-parasitic photosynthetic algae closely related to apicomplexans. Proteins from key metabolic pathways and from the endomembrane trafficking systems associated with a free-living lifestyle have been progressively and non-randomly lost during adaptation to parasitism. The free-living ancestor contained a broad repertoire of genes many of which were repurposed for parasitic processes, such as extracellular proteins, components of a motility apparatus, and DNA-and RNA-binding protein families. Based on transcriptome analyses across 36 environmental conditions, Chromera orthologs of apicomplexan invasion-related motility genes were co-regulated with genes encoding the flagellar apparatus, supporting the functional contribution of flagella to the evolution of invasion machinery. This study provides insights into how obligate parasites with diverse life strategies arose from a once free-living phototrophic marine alga.
Permanent Link: http://hdl.handle.net/11104/0254128