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Independent, rapid and targeted loss of highly repetitive DNA in natural and synthetic allopolyploids of Nicotiana tabacum
- 1.0381552 - BFÚ 2013 RIV US eng J - Journal Article
Renny-Byfield, S. - Kovařík, Aleš - Chester, M. - Nichols, R.A. - Macas, Jiří - Novák, Petr - Leitch, A.R.
Independent, rapid and targeted loss of highly repetitive DNA in natural and synthetic allopolyploids of Nicotiana tabacum.
PLoS ONE. Roč. 7, č. 5 (2012), e36963. ISSN 1932-6203. E-ISSN 1932-6203
R&D Projects: GA ČR(CZ) GAP501/10/0208; GA MŠMT OC10037
Institutional research plan: CEZ:AV0Z50040702; CEZ:AV0Z50510513
Keywords : chromosome evolution * repetitive DNA * allopolyploid
Subject RIV: BO - Biophysics; EB - Genetics ; Molecular Biology (BC-A)
Impact factor: 3.730, year: 2012
Using next generation sequencing, a recently developed graph-based repeat identification pipeline, Southern blot and fluorescence in situ hybridisation (FISH) we characterise two highly repetitive DNA sequences (NicCL3 and NicCL7/30) of Nicotiana tabacum (tobacco). We show that the NicCL3 repeats have been largely eliminated from the T-genome component of tobacco genome.
Permanent Link: http://hdl.handle.net/11104/0211996
Number of the records: 1