Terminal restriction fragment length polymorphism analysis of soil microbial communities reveals interaction of fungi and chlorine bound in organic matter

0373578 - MBÚ 2012 RIV CZ eng J - Journal Article
Gryndler, Milan - Hršelová, Hana - Lachmanová, Z. - Clarke, N. - Matucha, Miroslav
Terminal restriction fragment length polymorphism analysis of soil microbial communities reveals interaction of fungi and chlorine bound in organic matter.
Folia Microbiologica. Roč. 56, č. 5 (2011), s. 477-481. ISSN 0015-5632. E-ISSN 1874-9356
R&D Projects: GA MŠMT 7F09026
Institutional research plan: CEZ:AV0Z50200510; CEZ:AV0Z50380511
Keywords : NATURAL CHLORINE * FOREST SOIL * ORGANOHALOGENS
Subject RIV: EE - Microbiology, Virology
Impact factor: 0.677, year: 2011

Presence of ribotypes of Archaea, Bacteria and Fungi were studied in soil samples taken at 13 localities in the Czech Republic and Norway in a terminal restriction fragment length polymorphism-based metagenomic approach. The data (intensities of terminal restriction fragments) were processed by distance-based redundancy analysis, correlating the abundances of ribotypes with soil concentration of AOX, other soil parameters including inorganic chloride concentration being taken as covariables. The only significant correlation of soil organically bound chlorine was observed for fungi, indicating that this microbial group is connected with metabolism of organically bound chlorine in forest soils
Permanent Link: http://hdl.handle.net/11104/0206662