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A-minor tertiary interactions in RNA kink-turns. Molecular dynamics and quantum chemical analysis
- 1.0370696 - BFÚ 2012 RIV US eng J - Journal Article
Réblová, Kamila - Šponer, Judit E. - Špačková, Naďa - Beššeová, Ivana - Šponer, Jiří
A-minor tertiary interactions in RNA kink-turns. Molecular dynamics and quantum chemical analysis.
Journal of Physical Chemistry B. Roč. 115, č. 47 (2011), s. 13897-13910. ISSN 1520-6106. E-ISSN 1520-5207
R&D Projects: GA AV ČR(CZ) KJB400040901; GA AV ČR(CZ) IAA400040802; GA ČR(CZ) GD203/09/H046; GA ČR(CZ) GA203/09/1476; GA ČR(CZ) GAP208/10/2302; GA MŠMT(CZ) LC06030
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : molecular dynamics * RNA * kink turn
Subject RIV: BO - Biophysics
Impact factor: 3.696, year: 2011
A-minor interactions are the most abundant tertiary contacts in large functional RNAs. We have studied A-minor interaction in kink turn structures using molecular dynamics and precise quantum chemical calculations. Main attention was paid to the substitutions and stability of receptor pair, which is involved in the A-minor interaction.
Permanent Link: http://hdl.handle.net/11104/0006793
Number of the records: 1