Skip to main content
Log in

Synthesis, X-ray Diffraction Studies, and Hydrogen Bonding Analysis of a New Phosphoramide Counterion in Solid State

  • Synthesis and Properties of Inorganic Compounds
  • Published:
Russian Journal of Inorganic Chemistry Aims and scope Submit manuscript

Abstract

In the present study, we report the structure of one new phosphoramidate counter ion. The single crystal X-ray diffraction analysis revealed that C18H18N3O4P1, consists of a discrete [C18H18N2OP]+ cation and NO 3 anion. The compound crystallizes in triclinic system, space group P-1, unit cell a = 9.4935 Å, b = 10.4556(4) Å, c = 11.1560(3) Å, α = 63.951(3)°, β = 67.039(3)°, γ = 66.017(3)°. The interaction between cation and anion has occurred through hydrogen bonding. The strength of different hydrogen bonds between two counter ions was studied by DFT calculations in the gas phase. We optimized the hydrogen atoms and kept all other atoms invariant in the optimization process. The H-optimized systems included one nitrate anion and one phosphoramide cation which were connected by special intermolecular interactions. The binding energies of these interactions were calculated (M062X/6-311G*) and corrected for the basis set superposition error (BSSE) using by counterpoise (CP) procedure. Moreover, the main noncovalent inter-molecular interactions were studied by Hirshfeld surface analysis and finger print plots.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. S. C. Tobias and R. F. Borch, J. Med. Chem. 44, 4475 (2001).

    Article  CAS  PubMed  Google Scholar 

  2. K. Gholivand, F. Molaei, N. Oroujzadeh, and R. Mobasseri, H. Naderi-Manesh, Inorg. Chim. Acta 423, 107 (2014).

    Article  CAS  Google Scholar 

  3. K. Gholivand, L. Asadi, A. A. Ebrahimi Valmoozi, et al., RSC Adv. 6, 24175 (2016).

    Article  CAS  Google Scholar 

  4. K. Gholivand, A. A. EbrahimiValmoozi, A. Gholami, et al., J. Organometal. Chem. 806, 33e44 (2016).

    Article  CAS  Google Scholar 

  5. C. McGuigan, M. R. Kelleher, P. Perrone, et al., Bioorg. Med. Chem. Lett. 19, 4250 (2009).

    Article  CAS  PubMed  Google Scholar 

  6. C. McGuigan, F. Daverio, I. Nájera, et al., Bioorg. Med. Chem. Lett. 19, 3122 (2009).

    Article  CAS  PubMed  Google Scholar 

  7. K. Gholivand, A. A. Ebrahimi Valmoozi, and M. Bonsaii, Pesticide BioChem. Physiol. 112, 40 (2014).

    Article  CAS  Google Scholar 

  8. L. Asadi, K. Gholivand, K. Zare, J. Iran. Chem. Soc. https://doi.org/10.1007/s13738-016-0836-8 (2016)

    Google Scholar 

  9. A. T. M. Serajuddin, Adv. Drug Delivery Rev. 59, 603 (2007).

    Article  CAS  Google Scholar 

  10. D. Braga, L. Maini, F. Grepioni, et al., New J. Chem. 24, 547 (2000).

    Article  CAS  Google Scholar 

  11. R. Soman, S. Sujatha, and C. Arunkumar, J. Fluorine Chem. 163, 16 (2014).

    Article  CAS  Google Scholar 

  12. G. Habermehl and G. Volkwein, Naturwiss. 55, 83 (1968).

    Article  CAS  PubMed  Google Scholar 

  13. CrysAlis PRO (Agilent Technologies, Yarnton, Oxfordshire, UK, 2010).

  14. L. Palatinus and G. Chapuis, J. Appl. Crystallogr. 40, 786 (2007).

    Article  CAS  Google Scholar 

  15. V. Petricek, M. Dusek, and L. Palatinus, Z. Kristallogr. 229, 345 (2014).

    CAS  Google Scholar 

  16. S. K. Wolff, D. J. Grimwood, J. J. McKinnon, et al., CrystalExplorer. Version 3.1 (2012).

    Google Scholar 

  17. F. L. Hirshfeld, Theor. Chim. Acta 44, 129 (1977).

    Article  CAS  Google Scholar 

  18. D. E. C. Corbridge, Phosphorus: An Outline of Its Chem., Biochemistry and Technology, 5th ed. (Elsevier, Amsterdam, 1995).

    Google Scholar 

  19. K. Gholivand, H. Mostaanzadeh, T. Koval, et al., Acta Cryst., Sect. B 65, 502 (2009).

    Article  CAS  Google Scholar 

  20. K. Gholivand, A. Madani Alizadehgan, F. Mojahed, and P. Soleimani, Polyhedron 27, 1639 (2008).

    Article  CAS  Google Scholar 

  21. D. G. Gilheany, Chem. Rev. 94, 1339 (1994).

    Article  CAS  PubMed  Google Scholar 

  22. K. Gholivand, F. Afshar, Z. Shariatinia, and K. Zare, Struct. Chem. 21, 629 (2010).

    Article  CAS  Google Scholar 

  23. K. Gholivand, Z. Shariatinia, and M. Pourayoubi, Z. Anorg. Allg. Chem. 632, 160 (2006).

    Article  CAS  Google Scholar 

  24. L. Yang, D. R. Powell, and R. P. Houser, Dalton Trans. 9, 955 (2007).

    Article  Google Scholar 

  25. K. Gholivand and Z. Shariatinia, Struct. Chem. 18 (1), 95 (2007).

    Article  CAS  Google Scholar 

  26. K. Gholivand, Z. Shariatinia, F. Afshar, et al., Main Group Chem. 6 (3), 231 (2007).

    Article  CAS  Google Scholar 

  27. K. Gholivand, C. O. Della Vedova, M. F. Erben, et al., J. Mol. Struct. 874, 178 (2008).

    Article  CAS  Google Scholar 

  28. M. D. Esrafili, F. Elmi, and N. L. Hadipour, J. Phys. Chem. A 111, 963 (2007).

    Article  CAS  PubMed  Google Scholar 

  29. M. Mirzaei, F. Elmi, and N. L. Hadipour, J. Phys. Chem. B. 110, 10991 (2006).

    Article  CAS  PubMed  Google Scholar 

  30. A. E. Reed, L. A. Curtiss, and F. Weinhold, Chem. Rev. 88, 899 (1988).

    Article  CAS  Google Scholar 

  31. S. F. Boys and F. Bernardi, Mol. Phys. 19, 553 (1970).

    Article  CAS  Google Scholar 

  32. M. J. Frisch et al., Gaussian 09, Revision B.01 (Gaussian, Wallingford, CT, 2010).

    Google Scholar 

  33. M. A. Spackman and D. Jayatilaka, Cryst. Eng. Commun. 11, 19 (2009).

    Article  CAS  Google Scholar 

Download references

Acknowledgments

The financial supports of this work were provided by Tarbiat Modares University, Tehran, Iran and Science and Research Branch, Islamic Azad University, Tehran, Iran. The crystallographic part was supported by the project 18-10504S of the Czech Science Foundation using instruments of the ASTRA lab established within the Operation program Prague Competitiveness, project CZ.2.16/3.1.00/24510.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Kh. Gholivand.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Fallah, N., Gholivand, K., Yousefi, M. et al. Synthesis, X-ray Diffraction Studies, and Hydrogen Bonding Analysis of a New Phosphoramide Counterion in Solid State. Russ. J. Inorg. Chem. 64, 557–564 (2019). https://doi.org/10.1134/S0036023619050061

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S0036023619050061

Keywords

Navigation