Multilocus phylogeny of arvicoline voles (Arvicolini, Rodentia) shows small tree terrace size

0383942 - ÚBO 2013 RIV CZ eng J - Článek v odborném periodiku
Martínková, Natália - Moravec, J.
Multilocus phylogeny of arvicoline voles (Arvicolini, Rodentia) shows small tree terrace size.
Folia zoologica. Roč. 61, 3-4 (2012), s. 254-267. ISSN 0139-7893. E-ISSN 1573-1189
Grant CEP: GA AV ČR IAA600930609
Institucionální podpora: RVO:68081766
Klíčová slova: divergence * evolutionary history * supertree * supermatrix * phylogenetic tree terrace * Microtus * Arvicolinae
Kód oboru RIV: EG - Zoologie
Impakt faktor: 0.494, rok: 2012

We combined mitochondrial (cyb, control region, coi, nd4) and nuclear (irbp, ghr, sry, lcat) DNA sequence data to infer phylogenetic relationships of arvicoline voles. The concatenated supermatrix contained 72.8 % of missing data. From this dataset, Bayesian inference showed close relationships of Arvicola and Chionomys, Proedromys with Lasiopodomys and Microtus gregalis, Phaiomys with Neodon and M. clarkei. Genus Microtus formed a supported group with Blanfordimys and N. juldaschi. The gene partition taxon sets were explained in the multilocus phylogeny in such a way that the resulting Bayesian inference tree represented a unique solution on a terrace in the tree space. This means that although the supermatrix contained a large proportion of missing data, it was informative in retrieving a phylogeny with a unique optimality score, tree likelihood.
Trvalý link: http://hdl.handle.net/11104/0213727